Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRR |
1 | 1ub9A | 0.10 | 0.10 | 3.57 | 1.03 | SPARKS-K | | KEIMKSHILGNPVRLGIMIFLLPRRAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEAKRFLS |
2 | 1pdnC | 0.24 | 0.21 | 6.69 | 1.06 | FFAS-3D | | ----NGRPLPNNIRLKIVE-MAADGIRPCVISRQLRVSHGCVSKILNRYQETGS---IRPGVIGGSKPRIATPEIENRIEEYKR |
3 | 2oa4A | 0.16 | 0.13 | 4.36 | 1.28 | HHpred | | LPPANTRRWVASRKIAVVRGVIYGLITLAEAKQTYGLSDEEFNSWVSALAEHGKDALKVTALKKYRQLL--------------- |
4 | 1mdmA | 0.21 | 0.20 | 6.42 | 1.28 | MUSTER | | GVFVNGRPLPDVVRQRIVELAHQ-GVRPCDISRQLRVSHGCVSKILGRYYETGS---IKPGVIGGSKPKVATPKVVEKIAEYKR |
5 | 2jrtA | 0.15 | 0.13 | 4.38 | 1.32 | Neff-PPAS | | LPPLDTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMIQKYRQLHHH------------- |
6 | 2jrtA | 0.17 | 0.13 | 4.29 | 1.05 | FFAS-3D | | LPPLDTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMIQ--------------------- |
7 | 2jrtA | 0.16 | 0.13 | 4.35 | 1.11 | HHpred | | LPPLDTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTM-IQKYRQL--------------- |
8 | 1pdnC | 0.23 | 0.21 | 6.74 | 1.16 | MUSTER | | VNQINGRPLPNNIRLKIVEMAAD-GIRPCVISRQLRVSHGCVSKILNRYQETGS---IRPGVIGGSKPRIATPEIENRIEEYKR |
9 | 2oa4A | 0.15 | 0.13 | 4.42 | 1.15 | Neff-PPAS | | --PANTRRWVASRKIAVVRGVIYGLITLAEAKQTYGLSDEEFNSWVSALAEHGKDALKVTALKKYRQLLEHHHHHH-------- |
10 | 1mdmA | 0.24 | 0.21 | 6.69 | 1.04 | FFAS-3D | | ----NGRPLPDVVRQRIVE-LAHQGVRPCDISRQLRVSHGCVSKILGRYYETG---SIKPGVIGGSKPKVATPKVVEKIAEYKR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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