Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | HALSKIFDLVMSGLSAEADSVHSDIDSPDEQDSVPHHKKLLEMYGFLLQWTIAAVETKAAEKSSTAPAARGRGKGKKGAAKDKDAAWDSATQLQGALEVMCKVLKLKLSKIFLTTSERDTFIGLLTRPVYMVLESEQRVKTTTIRMHCFKVLCIAVKHHGHGYAA |
1 | 5k7vA | 0.09 | 0.08 | 2.96 | 0.84 | SPARKS-K | | EFMARAISAIAELAKKAIEAIYRLADNHTT---DTFMARAIAAIANLAVTAILAIAALASN-------------------------HTTEEFMARAISAIAELAKKAIEAIYRTDKFMAAAIEAIALLATLAILAIALLATEEFMAKAISAIAELAKKANHTSPT |
2 | 3tj1A3 | 0.10 | 0.07 | 2.70 | 0.93 | FFAS-3D | | TQIIFVASYLTSWLNRYVIEREEEVDQRGGMERFKHFYAAFQALCYIFCFRHNIF---------------------------RDTDGNWECELDKFFQRMVIS-KFNPLKFCNENVMLM-FARIAQQECFSIIENNNNERSLATRQQFIDL-------------- |
3 | 1n4kA2 | 0.17 | 0.13 | 4.41 | 0.29 | HHpred | | -SPAEVRDLANDASKVLGSIAGKLEKGTITQNERRSVTKLLEDLVYFVTGG-------TN--SGQDVLEVVFSK------------PNRERQEQNILKQIFKLLQAPFT---------HAPFRHICRLCYRVLR-HSQQDYRKNQEYIAKQFGFMQKQIGYDVLA |
4 | 4uosA | 0.11 | 0.11 | 3.93 | 0.85 | MUSTER | | KMLEKAIKKVKEMLEKMIKEIKKMLENGEDEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIEL-AEKILKKAKEMAEKILKKVKEGVG- |
5 | 3gb8A | 0.10 | 0.10 | 3.55 | 0.72 | CNFpred | | IQLGRIYLDMLNVYKCLSENISAAIQANGEQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNVPAA-------REPEVLSTMAIIVNKLGGHIT---AEIPQIFDAVFECTLNMINKDFE-EYPEHRTNFFLLLQAVNSHCFPAFLA |
6 | 1vt4I3 | 0.14 | 0.11 | 3.74 | 0.66 | HHsearch-2 | | YALHRSIVD-------H-YNIPKTFDSDLDQYFYSHLHPERMTLFRMVFLDFRFLEQKIRHDSTAW--------------NASGSILN----------TLQQ-LKFYKPYI-CDNDPYERLVNAILDFLPKIEENLICSKYTDLMAEDEAIFEEAHKQVQRGGGG |
7 | 1eq1A | 0.10 | 0.09 | 3.34 | 0.79 | Neff-PPAS | | NAFEEMEKHAKEFQKTFSEQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSSSLQGAISDANG-------------------KAKEALEQARQNVEKTAEELRKAHPDVEKEANAFKDKLQAAVQTTVQESQKLAKEVASKQAYDDFVKHAEEVQKKLHEAATK |
8 | 1vt4I3 | 0.11 | 0.08 | 3.09 | 0.80 | HHsearch | | ------EYALHRSIVDH-YNIPKTFDSDLDQYFYSIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW--------------NASGSILN----------TLQQL-KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLMAEDEAIFEEAHKQVQRGGG- |
9 | 3ea5B | 0.09 | 0.08 | 3.25 | 0.85 | SP3 | | GFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARR--ELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAG-LH---DKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIK |
10 | 4uosA | 0.10 | 0.10 | 3.78 | 0.73 | PROSPECTOR2 | | GMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIEL-AEKILKKAKEMAEKILKKVKELGVG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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