Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KQLFFILIAFFTVAVPAVAQQLKTTRWDSYGVSFKAPADLVVEDDSSEGYIAGNDTYYLTIQLLEGEGLKKEELGQELKAIATDDEVTSQSSVQSFELPQFHGVQLKGNCEEEKCVYSYLLAKDGSCGFYVSIVYRQEN |
1 | 2xb3A | 0.13 | 0.11 | 3.76 | 1.16 | SPARKS-K | | -------------------SGLQAYVDSYDGYEFLYPRGWVQVQVEDPVFHDIETTENVSVVVNTVASTKEELPEEVGDRLLRNIIAPSESGATSQKADDKTYYILEYAVTLRHNLSSIAVSR--GKVYTLSVSAPEER |
2 | 2xb3A | 0.09 | 0.08 | 2.98 | 1.03 | CNFpred | | ---------------------LQAYVDSYDGYEFLYPRGWVQVQVEPVDVVFHDTTENVSVVVNTVSTKSLGSPEEVGDRLLRNIIASALIAATSQKADDKTYYILEYAVTQQRHNLSSIAVSR-GKVYTLSVSAPEER |
3 | 3hlzB1 | 0.14 | 0.11 | 3.71 | 1.00 | SPARKS-K | | -------------------GQGKKFISPGAWFS-NYPSDWNEFEDGEGSFLFYVWTGNFRISAFKGNA---SYGKDAIRQELKEN-----DSASLVKIGTWDCAYSKFQEEGTYYTSHLWITGTGNIAFECSFTVPKGG |
4 | 1tu1A | 0.07 | 0.06 | 2.35 | 0.69 | FFAS-3D | | -------------------------LYRLHEADLEIPDA--WQDQSINIFKLPASSFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLQWQREGRDLMLRQVFIERRPAVLITTLTTTPA- |
5 | 2lnjA | 0.09 | 0.08 | 3.04 | 0.39 | HHpred | | --------GPLGSCGGVGIASLQRYSDTKDGYEFLYPNGWIGVDVKGGVFRDLIENLSVIISEIPS-DKTLTDVGYRFKTVNDARQAELI-NAEARDEDGQVYYTLEYRVGDVHDLASVTTN---RGKLITFDLSTAED |
6 | 1vw1A | 0.10 | 0.10 | 3.70 | 0.70 | MUSTER | | NVRRVNNRYAEDYEIPSSVSSRKDYGWGDYYLSMVYNGDIINYKAASSDLKIY---ISPKLRIIHNGYEGQKRNQCNLMNKYGKLGDKGVNPNNSSNKLMFYPVYQYSGNTSGLNQGRLLFHRDTTYPSKVEAWIPGAK |
7 | 3lydA | 0.08 | 0.06 | 2.52 | 0.96 | CNFpred | | ------------------------------GFTVPIPETWQPDP--QFAARPHTPTPNIIGTVRRAATGALHNQRTELDQRATQLPDYAERGRTETTVDGFPAYHIEYAYRTITIAQMITLVEVSAVDIIQLTATCAGD |
8 | 2lnjA | 0.09 | 0.08 | 3.04 | 0.82 | HHsearch-2 | | --------GPLGSCGGVGIASLQRYSDTKDGYEFLYPNGWIGVDVKGVVFRDLIENLSVIISEIPS-DKTLTDVGYRFKTVNDSRQAELI-NAEARDEDGQVYYTLEYRVGDVHDLASVTTN---RGKLITFDLSTAED |
9 | 2xb3A | 0.12 | 0.10 | 3.56 | 0.93 | Neff-PPAS | | ----------------------QAYVDSYDGYEFLYPRGWVQVVEDPVDVVFHDITENVSVVVNTVASTKEEVGDRLLRNIIAPSESGRSSALIAATSQTYYILEYAVTLPAQQRHNLSSIAVSRGKVYTLSVSAPEER |
10 | 2lnjA | 0.09 | 0.08 | 3.04 | 0.71 | HHsearch | | --------GPLGSCGGVGIASLQRYSDTKDGYEFLYPNGWIGVDVKGGVFRDLIENLSVIISEIPS-DKTLTDVGYRFKTVNDARQAELI-NAEARDEDGQVYYTLEYRVGDVHDLASVTTN---RGKLITFDLSTAE- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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