Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | NLLVQWIKAHSMKDMEKFGDQIWQDLDKLFKDMMENTEDSTETENTFCGMEDSKGVALGNSTEKELCKILLRIFFWINGLKLKWDNVAGWQWVEKEWKKESADEKQLQAYLRCLVGKVTMMRMFGTHCALDKVANLVKEAVDGYVGSFGSGDHYKVCEEVDISSVRMGGRLIWKELGQW |
1 | 5cwfA | 0.12 | 0.11 | 3.74 | 0.86 | SPARKS-K | | EALKKAVELAKKNND----DEVAREIERAAKEIVEALRENSDEMAKVMLAAKNND----DEVAREIARAAAEIVEALRENNSDEMAKVMLKAVLLAAKNN--DDEVAREIARAAAEIVEALREN----NSDEMAKKMLELAKRVLDAAKN---------NDDETAREIARQAAEEVEAD |
2 | 3m1cA3 | 0.10 | 0.08 | 2.88 | 0.81 | FFAS-3D | | SLVAHAYQLAFVLDSPAAYGAVAPSAARLIDALYAEFLGGR---------------ALTAPMVRRALFYATAVLRAP--------------------FLAGAPSAEQRERARRGL------LITTALCTSDVAAATHADLRAALARTDHQKNLFWLCSDIPADVMAQQTRGVASVLTRW |
3 | 1vt4I | 0.08 | 0.03 | 1.31 | 0.27 | HHpred | | ------------------------------------------------------------------------------------------------------HDSTAWNASGSILNLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE---ENLICSKYDLLRIAIFEE-AHKQVQR- |
4 | 4uosA | 0.15 | 0.15 | 4.87 | 0.82 | MUSTER | | KMLEKMIEEI-KKMLEKAIKKVKEMLEKMIKEIKKMLENGEDKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGE--DSEKILKKAKEMAEKILKMV-----IELAEKI-LKKAKEMAEKILKKVKEL |
5 | 4hatC | 0.09 | 0.06 | 2.33 | 0.60 | CNFpred | | KCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLKATYANA----NGNDQSFLQDLAMFLTTYLARNRALLESD----------------ESLRELLLNAHQYLIQLSKI--------EERELFKTTLDYWHNLVADL------------------------------- |
6 | 1vt4I3 | 0.09 | 0.07 | 2.57 | 0.61 | HHsearch-2 | | --------------EYALHRSIVDH-----YNIPKTFDSDD-LIPPYLDQYFYSHGHIEHPERMTLFRMVFLDFRFLQKIRHDST-A----W-----NASGSILNTLQQLKF----------YKPYICDNDPKYERLVNAILDFL---PKIEENLICSKYDLLRIALDEAIFEEAHKQV |
7 | 4uosA | 0.07 | 0.06 | 2.60 | 0.84 | Neff-PPAS | | ---------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGED-SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKK |
8 | 2kixA | 0.15 | 0.03 | 0.94 | 0.36 | HHsearch | | --------------------------------------------------------MLEPFQILSISSFILSALHFIAWTIGHL----------------N----QIK---R------------------------------------------------------------------- |
9 | 4nk1A | 0.12 | 0.11 | 3.73 | 0.71 | SP3 | | EARIDFVFPEVKFPSKKVYLAAEELLRKLVEVHHENLMKSK--IHYL--------FPTSHEQLRSLVKRSADFVVEMCGGPPYYTLTRGEPKMRARHFSVTIDEKAREIWLACYKHALKDVHFPLSV--LEEFWQWIESFSIRMINRRTTLEPP---RRVPYSEI-------QDFFV-- |
10 | 5h7cA3 | 0.11 | 0.09 | 3.46 | 0.64 | PROSPECTOR2 | | DIVKQLAEVAKEATDKELVIYIVKILAELASELVNEIVKQLAEVAKEATD-------------KELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEEQSAFYEILSLPNLNEEQRNAFIQSLKDDPSQSAN-----LLAEAKSLNVNQAVKQLAEKAKEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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