>PF12751 (390 residues) TVETETVSSIPQVALAPNSKMESSSGTLKAKASTETIKPKKDKKKVGRKQPAVTTAIGSS KADIFEAKVASAVDEADSSDSEETFVYDSNPPDAGDRPRRYHSRTPSATSMASQADRNAM RSIHSILENGGGPPPVIMKKGMKFVNSFAGSGGENLTAGEDDGKGSGRSAGPGSGRGTAR HHHHNLTHIGRWGRNPGNTHTSLFDNDSPFPNAARSKFSGVQSRQSSGPPSPRFLNHSRG PSGNGKRPLVSGPSYDLDDPTTGADDERTPLLSPSMRSARGRSRRTPASLRHLESQSYRQ QPSYLNRFAACLVITMMLLLVITGAIGFMFATSQPLMDIELVSIKNVVASDPELMFDLTV KAHNPNIVVVSVDQANIEVFAKSPHAGSDS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TVETETVSSIPQVALAPNSKMESSSGTLKAKASTETIKPKKDKKKVGRKQPAVTTAIGSSKADIFEAKVASAVDEADSSDSEETFVYDSNPPDAGDRPRRYHSRTPSATSMASQADRNAMRSIHSILENGGGPPPVIMKKGMKFVNSFAGSGGENLTAGEDDGKGSGRSAGPGSGRGTARHHHHNLTHIGRWGRNPGNTHTSLFDNDSPFPNAARSKFSGVQSRQSSGPPSPRFLNHSRGPSGNGKRPLVSGPSYDLDDPTTGADDERTPLLSPSMRSARGRSRRTPASLRHLESQSYRQQPSYLNRFAACLVITMMLLLVITGAIGFMFATSQPLMDIELVSIKNVVASDPELMFDLTVKAHNPNIVVVSVDQANIEVFAKSPHAGSDS | |||||||||||||||||||
1 | 4btgA3 | 0.12 | 0.11 | 3.70 | 1.48 | SPARKS-K | KDLNGSARGLTQAFLSVGALQLPLQFTRTFSASMTSELLWEAYYRVGRTATYPF--DANAVVSSVLTILGRLWS-------------PSTPKELDPSARLR-----NTNGIDQLRSNLALFIAYQDMVKQRGRAEVI----------FSDEELSSTIIPW---FIEAMSEVSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQ-FAKEITAFTPVKLANNSNQ----RFLDVEPGRMSATLAPIGNTRG---TVNSNGA--EMTLGFPSVVERDYALDRDPMVAIAALRTGIVDESARASNDLKRSMFNYYAAVMHYAVA-------HNPEVVVS--EHQGVAAEQGSLYLVWNVRTVGYNAISIRTPE-PLEAIAYNKPIQPSE | |||||||||||||
2 | 5az4A | 0.12 | 0.12 | 4.09 | 1.16 | MUSTER | NIGT---SSRNLYALDSVHGWNTKTQRAEDENDTGTTQFY-----TTSKNSVEVTEKGVDAGSLFNAKWVSYADATYSTNKVGVNAFDPNLQQNQTAAFWGTANQKVNLDITVRIQNADIQSIDDAIAYINTFTAPTDTRDGTGVKAVKNKDGSGIDFVNDNADGTTDNMKNINLVVANTNTAGELWNAVWNNNNQTFTFNNNGNGQAGTPTINKNGSSLWTATNITFTPQPPQAATNVQLTGGLNAQIITAHKYIYSSNPVDIGPMYNPDGGPAFQPGANATTRPTEPGSAAYWDAVNGGLLNTEDLRELLQRDARYGVDYDGSGTFAAADINQNIKVVVTAHFAISNANEQSTVPPNAINGVGNATTTDPKNMSFNITAYSNKQGTVS | |||||||||||||
3 | 3j8dA | 0.09 | 0.08 | 3.03 | 1.85 | Neff-PPAS | -----RASESVDSFIYQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVETDDAATYYCQ---QNNEDPYTFGGGTKLEIKQVQLLQPGAELVKPGASMKLSCKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKYNEKFENRASLTVDKHSSTAYMQLTSEDSAIYYCARWFFPWYFDVWGTGTTVTVSRADAAPTVSIFPPSSEQLTSGFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYEEATHKTSTSPIVKSFNRSAKTTAPS---------------------------VYPLAPVCGGTT---------GSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQS | |||||||||||||
4 | 2nbiA1 | 0.13 | 0.12 | 4.00 | 1.53 | PROSPECTOR2 | QPSDLNPSSQPSVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTP-------------PEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTA--------VGRPDCDVLPFPNNLGCPAC-------CPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRP------------------DCNVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSSPTMLPSPSPSAVTVPLTPAPSSAPTR | |||||||||||||
5 | 4btgA | 0.13 | 0.13 | 4.35 | 1.26 | SPARKS-K | SMTSELLWEVGKGNIDPAGGALSNPEIWRKGSSNRAIKADA-----VGKVPPTAITLAPSEHELFTDFVCHVLSPLGFILPDAAYVY---------RVGRTAT-YPNFYALVDCVRASDLRRMLTALSSVKMLQATFKAKGAALISQHAATTAFERSRGNFDANPSTPKELDPSARRNTNGIDQLRSNLALFIAKQRGRAEVIFSDESPFKLRPINESAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTFASQRGTGFPSVVERDYALDRDPMVAIAALRTGSNDLKRSMFNYYAAVMHYAVAHNPEVVVS--EHQGVAAEQGSLYLVWNVRTELRIPVGIRTPE-PLEAIAYNKPIQPSE | |||||||||||||
6 | 2akhY | 0.08 | 0.07 | 2.71 | 0.63 | FFAS-3D | ------MAKQPGLDFQSAKGRIGSFISI----FALGIMPYQLLTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLA-IFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDK----------VMTRLTLVGALYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMD---------------------------------------- | |||||||||||||
7 | 1yycA | 0.13 | 0.03 | 1.06 | 0.52 | HHpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHLEASAVVEEK----ASVISSLLDKAKGFFA----EKLANIPTPEATVDDVDFKGV--TRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGT | |||||||||||||
8 | 3chnA | 0.09 | 0.08 | 3.14 | 1.11 | MUSTER | KASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVT-FTRDTSATTAY-------------LSSLRPEDT--VYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNQGFFPQEPLSVT-SESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT-------TCTAAYPESKTPLTATLSKSGNTFRP--EVHLLPPPSELALNELVTLTCLARGFSPKDVLVRQGSQELP---REKYLTWAS | |||||||||||||
9 | 2rdyA | 0.19 | 0.04 | 1.32 | 0.61 | CNFpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDGNFSATAGIAEMLLQSHQGYLEFLPALPDSWKDGYVKGLRGRG----GYEVDLAWTNGALVKVEIVSTTQTCEVLTRISMRITES | |||||||||||||
10 | 1yycA | 0.09 | 0.02 | 0.87 | 0.79 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GHH----HHHHLEASA--DEKVVEKASVISSLLDKAKGFFA----EKLANIPTPE--ATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGT | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |