Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MEFFNQAITVLQTLVVAIGAGLGVWGVVNLMEGYGNDNPGAKSQGMKQLMSGGGVILIGTQLIPLLSGLF |
1 | 5jqzA | 0.07 | 0.07 | 2.93 | 1.10 | SPARKS-K | | TAIEANSRMLKALIEIAKAIWKALWANSLLLEATSRGDTERMRQWAEEARKIYKEAEKIIDRADEIVEEA |
2 | 2xndJ | 0.10 | 0.10 | 3.67 | 1.18 | MUSTER | | AKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLIL--F |
3 | 5dn6J | 0.20 | 0.20 | 6.40 | 1.05 | Neff-PPAS | | LGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLL |
4 | 5dn6J | 0.21 | 0.20 | 6.37 | 0.87 | SPARKS-K | | --NLGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLARNPSAAASQTATLFIGMAFAEALGIFSFLVALLL |
5 | 5zleA | 0.09 | 0.09 | 3.24 | 0.77 | FFAS-3D | | -AFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPAYSTPEGVFVNTLGLLILVFGALIFWIV---- |
6 | 5sv0B | 0.04 | 0.04 | 2.14 | 0.14 | HHpred | | LATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQ- |
7 | 5dn6J | 0.20 | 0.20 | 6.40 | 1.16 | MUSTER | | LGQLGQYLGAGLACVGMAGAAMGVGNVAGNYLAGALRNPSAAASQTATLFIGMAFAEALGIFSFLVALLL |
8 | 5gpjA | 0.16 | 0.16 | 5.21 | 0.67 | CNFpred | | --GVGKAFITAFRSGAVMGFLLAANGLLVLYIAINKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGI |
9 | 5sv0B | 0.17 | 0.16 | 5.17 | 0.75 | HHsearch-2 | | MGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIATTNLAVVAPGIAEA-----LLATAIGLVAAIPAVV |
10 | 2xndJ | 0.09 | 0.09 | 3.29 | 1.01 | Neff-PPAS | | AKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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