Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | PLHCFLDEFANIGKIPNFETLVSTIRSRNISVSIILQNIAQLKAMYKTGWETIAGNCDSILFLGSNEETTTKWISGMLGKETIDTKTRSMSRGRNGSTSTNYQRTGRELMTPDEIAHMD |
1 | 1e9sF | 0.24 | 0.23 | 7.07 | 1.80 | SPARKS-K | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYVKEAQTLRASFRSLVVLGGSDPKTNEDMSLSLG----EHEVERDRYSKTG---RALERVRERVVMPAEIANLP |
2 | 1e9sF2 | 0.24 | 0.23 | 7.07 | 1.54 | FFAS-3D | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGKEAQTLRASFRSLVVLGGSDPKTNEDMSLSLGEHEVERDRYSKT-------GRALERVRERVVMPAEIANLP |
3 | 1e9sF | 0.24 | 0.23 | 7.07 | 2.52 | HHpred | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVEAQTLRASFRSLVVLGGSRPKTNEDMSLSLGEHEVERDRYSKTG-------RALERVRERVVMPAEIANLP |
4 | 1e9sF | 0.25 | 0.24 | 7.29 | 2.05 | MUSTER | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGKEAQTLRASFRSLVVLGGSRPKTNEDMSLSLGEHEVERDRYS-------KTGRALERVRERVVMPAEIANLP |
5 | 1e9rA | 0.25 | 0.22 | 6.79 | 1.60 | CNFpred | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVEAQTLRASFRSLVVLGGSDPKTNEDMSLSLGEHEVERDR-------------ALERVRERVVMPAEIANLP |
6 | 1e9sF | 0.24 | 0.23 | 7.07 | 1.80 | HHsearch-2 | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVEAQTLRASFRSLVVLGGSRPKTNEDMSLSLGEHEVERDRYSKTG-------RALERVRERVVMPAEIANLP |
7 | 1e9sF2 | 0.24 | 0.23 | 7.07 | 1.22 | Neff-PPAS | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYVKEAQTLRASFRSLVVLGGSDPKTNEDMSLSLGEHEVERDRYSKT-------GRALERVRERVVMPAEIANLP |
8 | 1e9sF | 0.24 | 0.23 | 7.06 | 2.68 | HHsearch | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVEAQTLRASFRSLVVLGGSRPKTNEDMSLSLGEHEVERDRYSKTG-------RALERVRERVVMPAEIANL- |
9 | 1e9ra | 0.25 | 0.22 | 6.79 | 0.69 | PROSPECTOR2 | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVEAQTLRASFRSLVVLGGSRPKTNEDMSLSLGEHEVERDR-------------ALERVRERVVMPAEIANLP |
10 | 1e9sF | 0.24 | 0.23 | 7.07 | 1.45 | SAM | | RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVEAQTLRASFRSLVVLGGSRPKTNEDMSLSLGEHEVERDRYSKTG-------RALERVRERVVMPAEIANLP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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