Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | AKQLAILIYAILKEQKKTRGKARMNTMLRSGKELRVFAVKPEDLKTFCQEAKRYGVLYCVLKSKNSKDSVVDVMVRAEDASKINRIFEKFEMATVDMGTIEQDLERGLEKAGEGEIQTHQQEERGQSTNPTKGREAKSSPSEPTYEARRAAGGTSKPNAKPSVKQELRNIREQQGKNAAR |
1 | 2f5cA | 0.15 | 0.11 | 3.56 | 0.62 | SPARKS-K | | MEDYIEQIYMLIEEKGYAR-VSDIAEALA---------VHPSSVTKMVQKLDKDEY---LIYEKYR-----GLVLTGKRLVYRHELLEQFLIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDD----------------------------------ARKKDLKSIQKKTEHH |
2 | 1xtyA | 0.10 | 0.05 | 1.86 | 0.78 | FFAS-3D | | VAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNLDEIISRAKKAETMNLPFSIIEDTQLEPGTITCLGIGPPENLVDSITGDLKL---------------------------------------------------------------------------------------- |
3 | 1q7sA | 0.15 | 0.07 | 2.44 | 0.47 | HHpred | | -SHAAVSAYKQIQR----RNPEMLKQWEYCGQPKVVVKAPEETLIALLAHAKMLGLTVSLIQDAGRAPGSQTVLGIPGPADLIDKVTGHLKLY--------------------------------------------------------------------------------------- |
4 | 6fmlG | 0.11 | 0.11 | 4.00 | 0.80 | MUSTER | | GNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASF |
5 | 1xtyA | 0.10 | 0.05 | 1.87 | 0.71 | CNFpred | | VAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNLDEIISRAKKAETMNLPFSIIEDAGEPGTITCLGIGPAPENLVDSITGDLKLL--------------------------------------------------------------------------------------- |
6 | 1rlkA | 0.11 | 0.06 | 1.99 | 0.52 | HHsearch-2 | | VAHAAVTCAIRSMK----INRDVFNEWYDEGQRKIVVKVNLDEIMEIKRMADSMGIVNEIVQDRGYEPGTITCIGLGDEEEKLDKITGKYKLL--------------------------------------------------------------------------------------- |
7 | 5cwmA | 0.17 | 0.17 | 5.65 | 0.79 | Neff-PPAS | | VEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEVRVAELSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQERVKELRER |
8 | 1rlkA | 0.11 | 0.06 | 1.99 | 0.58 | HHsearch | | VAHAAVTCAIRSMK----INRDVFNEWYDEGQRKIVVKVNLDEIMEIKRMADSMGIVNEIVQDRGYEPGTITCIGLGDEEEKLDKITGKYKLL--------------------------------------------------------------------------------------- |
9 | 1rlkA | 0.11 | 0.06 | 1.99 | 0.71 | SP3 | | VAHAAVTCAIRSMKIN----RDVFNEWYDEGQRKIVVKVNLDEIMEIKRMADSMGIVNEIVQDRGEPGTITCIGLGPDEEEKLDKITGKYKLL--------------------------------------------------------------------------------------- |
10 | 5ey5A | 0.08 | 0.08 | 3.10 | 0.67 | PROSPECTOR2 | | MNRIAEAFEELKKKGEKDPDLETTLELVRAGIPFSDPLADGPTIQRASQRALASGTTLDKVFEEKNTDVPIVFLTYYNPIFRIERFVKECAVPDLPPEEAADLAAAAEKYGAPTSTDERIKMIAKHASGFVYCVSVTGVTGARSEISRIRKHTDLENQDEEDIVEEVREFVRELREAEHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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