Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | PKLGLLGLFGLFGFLGFVPQFFGESGVLDVPFPLIFFCFFGFFGFYYEGKMSGTMIDERYEANVNRAAAIANRVSLTLIIMAAILALSLFRIHDSYGMLKLLLAVIGFAFGLSLFLQEYLLYRFEN |
1 | 3rlbA | 0.12 | 0.12 | 4.19 | 0.97 | SPARKS-K | | LLSLRRGTAGLVGGLIWGILSMITGHAYILSLSQAFLEYPVSLGIAGLFRQKTAPLK---LAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWWGAVAYSLAVNGISGILTAIAAFVILIIFVKKFP |
2 | 4hkrA | 0.15 | 0.14 | 4.83 | 0.97 | FFAS-3D | | -KLKASSKTSAL-LSGFAMVAMVEVQMLIAFAICTTLLVAVHMLALMISTCILPNPHERLHWYIETAWAFSTLLGLILFLLEIAILCWVKFYDLSATVVLIPVMIIFMAFAI-HFYRSLVSHKYE- |
3 | 3aqpA | 0.11 | 0.10 | 3.45 | 0.25 | HHpred | | ---VAHDVAIVAGMYSLL----------GLESIPTIAALLTIVGYSVSDRIRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALL--FLGGSVLRDFALAIFVGIFVGTYSSIYVVSALVVAWKN |
4 | 6ei3A2 | 0.11 | 0.11 | 3.98 | 0.87 | MUSTER | | WAFGIPGILMFIATAVFWLGRKRYVRVPLPPKVTPFFSLFDQKASTWVLQGREMRMP--AWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPTSLRRMTSGIAFSGVAWIAVGAIQVAMDG |
5 | 3rkoC | 0.09 | 0.09 | 3.33 | 0.96 | CNFpred | | --GFFIAFAVKMPVHGWLPDAHSQAPTA-ILLKTAAYGLLRFSLPLFPNASAEPIAMWLGVIGIFYGAWMARLIAYTSVSHMGFVLIAIYTSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT |
6 | 6d4hA | 0.14 | 0.13 | 4.34 | 0.61 | HHsearch-2 | | GAVGLAGVAAGLGLCSLI--G----IS-FNAATTPFLGVGVDDVFAFSETGQRIPFEDRTGECLKRTGASVALTSISNV--TAFFM-AALI-PIPRAFSLQAAVVVVFNFAMVLLIFPAILSMDLY |
7 | 4tkrA | 0.10 | 0.10 | 3.56 | 1.05 | Neff-PPAS | | -FWAAGFAGLLWGLLHFLTGKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRSNLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGWGAQLFSIVMNGASCLGTVLVSGIIISILLKTSPK |
8 | 5namA | 0.15 | 0.04 | 1.33 | 0.36 | HHsearch | | ------------------------------------------------------------------------------------------MNITSQMN--KTIIGVSVLSVLVVSVVAVLVYKFY- |
9 | 6a2jA3 | 0.11 | 0.10 | 3.40 | 0.94 | SP3 | | ------------PLQIGKKMQFHMIGILIYSYIVVLLLFVWIIVAAVHAITSYKDQ---------KQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYE |
10 | 4tkrA | 0.15 | 0.15 | 5.07 | 0.64 | PROSPECTOR2 | | NSLGMIPMYGFAGLLWGLLHFLTGKAYILMPSQAIIFSFIAFSGSKQVRSNLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFAYAFQGWGAQLFSIVMNGASCLGTVLVSGIIISILLKFLP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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