Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MTAPCGLDCFNCPMYLAKENKELQSMISQKLKIPIEHTSCDGCRNMEGKIIFIGMTEPCNVYKCIKEKKIEFCSECKDFPCDYLH |
1 | 4lu2A | 0.18 | 0.15 | 4.99 | 1.09 | SPARKS-K | | ------EFSEDCENIFHDNAYLLKLDCEEYDDISDEEIYEITVVSSEDQEKVAVSTQDCTIYDCYMKKKI--CNYYPENMH---- |
2 | 2yhnA | 0.19 | 0.13 | 4.18 | 1.15 | MUSTER | | -------------------------VLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQ--LQSCPVCRSRVEHVQH |
3 | 2yhnA | 0.19 | 0.13 | 4.18 | 1.45 | Neff-PPAS | | -------------------------VLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQ--LQSCPVCRSRVEHVQH |
4 | 5ml1A | 0.11 | 0.11 | 3.81 | 0.93 | SPARKS-K | | VFGAGCTDVCKQTPCGCATSGCNCTDDCKCQSCKYGAGCTDTCKQTPCGCGSGCNCKDCRCQSCSTGKGCTGC-KCRSCSCK--- |
5 | 6a0nA2 | 0.13 | 0.11 | 3.69 | 0.35 | FFAS-3D | | -------YHGSCVTFAVTAAIDAAQLCNLELGSYLAIHDKAKASGWNGS-------FGYWVLQQISEYGINGCAGVREYPLEDEN |
6 | 4kblA2 | 0.23 | 0.16 | 5.15 | 0.28 | HHpred | | ------------------VKCKWLKKWIKKC-IAANTKECPKCHVTIEK-D-----GGCNHMVCRNQCKAEFCWVCLGYNCNRYN |
7 | 2l7xA | 0.13 | 0.11 | 3.68 | 1.07 | MUSTER | | KPQTC--ICET--TPVNAIDAEMHDLNCSY-------NICPYCASRLTSDGLARHVTQCPKRKEKVEETELY----ERIPWVVRK |
8 | 2jm1A | 0.22 | 0.18 | 5.58 | 0.69 | CNFpred | | -----VLICKNCFKYYMSDDISRDSD--------GMDEQCRWCAEG--GNLICCDFCNAFCKKCILRN-QWYCYICHPEPLLDLV |
9 | 4kblA2 | 0.23 | 0.16 | 5.15 | 0.66 | HHsearch-2 | | ------------------HDPKWLKKWIKKC-IAANTKECPKCHVTIEK-D-----GGCNHMVCRNQCKAEFCWVCLGYNCNRYN |
10 | 2kwjA2 | 0.17 | 0.13 | 4.26 | 1.36 | Neff-PPAS | | -------------------TLNMTEAVKTYKWQCIECKSCILCGTSEN-DDQLLFCDDCDRMYCLNPPVAESCHLCWELLKEKAS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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