Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | SIVFSSSTGNTKKLADAVYEILPKDKCDYFGENDSKIPPSDLLYVGFWTDKGSADTKTLELLAKLKNKKIFLFGTAGFGGSDVYFEKILGQVKQSIDSSNAVIGEYMCQGKMPQSVRERYVKMKENPEHPANLDMLIANFDCALSHPDMDDLEKLKKII |
1 | 5widA | 0.16 | 0.13 | 4.38 | 1.26 | SPARKS-K | | IVVYLSTSGNTKAMAEAIGNGIESKNVQVISFYDVKLKEAEAIAVGSSTFYYKMLLPMEKFMDEPQGKIGAAFGSYG--WSGEAPILIAEKMREM---GMTVMPVLRILHKPTDKDLQECKRLGIDIAEKVKHK------------------------- |
2 | 4j8pA | 0.16 | 0.12 | 3.96 | 1.73 | FFAS-3D | | LVAYFSATGTTARAAKLVAEAVDGTFYEIQPAKKGSLAEYDTIYIGFPIWWNLAPRIINTFIESFAGKTVIPFATSGSSSISNAEKELQTNY-----PGINWGKGRLLNGASRETVKQWIKK------------------------------------- |
3 | 3esxB | 0.17 | 0.16 | 5.16 | 2.23 | HHpred | | GLFYGTQTGKTKSVAEIIRDEFGNDVVTLHDVSQTDLNDYQYLIIGCPTWNGKLQSDWEGLYSEFNGKLVAYFGTGDQIGYADNFQDAIGILEEKIQRGGKTVGYWSTDGYKFNDSKGKFVGLALDDNQSKLTDDRIKSWVAQLKS------------- |
4 | 2mokA | 0.21 | 0.21 | 6.57 | 1.48 | MUSTER | | GIFFGSDTGNTENIAKMIQKQLGKDVADVHKSSKEDLEAYDILLLGIPTWYGEAQCDWDDFFPTLEGKLVALFGCGDQEDYAEYFCDALGTIRDIIEP-ATIVGHWPTAGKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQI----SEELHLDEILN |
5 | 5widA | 0.19 | 0.15 | 4.87 | 0.99 | CNFpred | | IVVYLSTSGNTKAMAEAIGNGIESKNVDVQVIS-DELKEAEAIAVGSSTFYYKMLLPMEKFMDET-GKIGAAFGSYGW--SGEAPILIAEKMREM---GMTVMDVLRILHKPTDKDLQECKRLG------------------------IDIAEKVKHK- |
6 | 2r97A | 0.16 | 0.15 | 4.99 | 0.74 | HHsearch-2 | | LVLYYSMYGHIETMARAVAEGASKDGAVVKRVPEQELADYDAIIFGTPTRFGNMSGQMRTFLDQTYGKLASVFSSTGTGG-G--QEQTITSTWTTLHHGMVIVPIGYAAELFDVS-----Q-VRGG---TPYGATTIA-GGDGSRQPSQEELSIARYQG |
7 | 2mt9A | 0.16 | 0.15 | 5.04 | 1.41 | Neff-PPAS | | GLFYGSSTCYTEMAAEKIRDIIGPELVTLHNDSPKLMEQYDVLILGIPTWFGEIQEDWEAVWDQLDGKIVALYGLGDQLGYGEWFLDALGMLHDKLSTGVKFVGYWPTEGYEFTSPKPVIADGQLETNQYDLSDERIQSWCEQILNEMAEHYA------ |
8 | 4nulA | 0.18 | 0.14 | 4.52 | 1.14 | HHsearch | | KIVYWSGTGNTEKMAELIAKGIIESGKNTINVSDDELLNEDILILGCSAMGPEVLSEFEPFIEEISGKKVALFGSYGWGD-GK----WMRDFEERMGYGCVVVEPLIVQNEPDEA-EQDCIEFG---------KKIAN-I------------------- |
9 | 1ag9A | 0.22 | 0.21 | 6.53 | 1.22 | PROSPECTOR2 | | GIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKEDLEAYDILLLGIPTYYGEAQCDWDDFFPTLNGKLVALFGCGDQEDYAEYFCDALGTIRDIIPRGATIVGHWPTAGYHF------------EASKGLADDDHFVGLAIDEDRQPELTAERVEKWV |
10 | 3esxB | 0.15 | 0.14 | 4.64 | 1.35 | SAM | | GLFYGTQTGKTKSVAEIIRDEFGNDVVTLHDVSQTDLNDYQYLIIGCPTWNGKLQSDWEGLYSEFNGKLVAYFGTGDQGY-ADNFQDAIGILEEKIQRGGKTVGYWSTDGYKFNDSKALRNGKFV--------------LALDEDNQSKLTDDRIKSWV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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