Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | FEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANKLFRDEIVAEWKKVKGKMSLHVHCHISGGHFLLNLIAKLRYYIFCKELPVVLKAFVHGDEYLLNNHPELQESLVWVYFHSNIPEYNKVECWGPLWE |
1 | 4fyeA2 | 0.15 | 0.15 | 5.11 | 0.75 | SPARKS-K | | MLDGKQVVVVNSQYDKHGRPVTGRD-TLIHSKEGEEQFIMYIPCYTKRQQRLMLGNSSMARMIAGTRHSDGTVTIHHDSFSGPGARDYKKLAIKAVTLINQEEVIQTLAQRQIDRDLWNKIPQLIKLSVTECYTQVVTAGQRVAAENQKEQ |
2 | 3j20A | 0.16 | 0.15 | 4.83 | 0.52 | FFAS-3D | | FGGVEVGLTPADDPEKV----LNRVVEVTLKDVTGKLYFQVGMKLARSYIRSLVRR-KTTRIDGIFNTTKDGYKLRVMMAIAMRRIQTSQERAIRQEIIYKKFKDFVLESVNGAAEIAKEAKKIYPRKAEIR---------KIKVLEEPQ- |
3 | 2xzm4 | 0.09 | 0.07 | 2.56 | 0.27 | HHpred | | FSSKSFGKTLVTGNRIASEEIKGRVVESTLADLKDNKTSFYGLDITRDRLCSMI-RKWLIEARVDCKT-NDGYIIRVFTLAFTKKTSATAKSSQVR-AIRRKINTFITNAAKLGIEFSK-------------------------------- |
4 | 5m86A2 | 0.14 | 0.13 | 4.49 | 0.67 | MUSTER | | DQVYKLTLSIDNPHVTKKNIAWRRESKAPHKDNTEDYIYALDDTHTIPDI--LIDTAYTGEKGTVYIGKHSNYDIYRAFFGDALTNHSSVISERRWSKYED----KLFLYFYTTVDFLRLIPAILDST-----RKNFPKVNKIDEITPA-- |
5 | 2mouA | 0.07 | 0.05 | 2.18 | 0.61 | CNFpred | | --DSDTFICHTITQSFAVGSISPRDFIDLVYIKRMNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMPAYSKLVMFVQTEMR---GKLSPSIIEKTMPSNLVNFILNAKDGIKAHR--------------------------------- |
6 | 2wmfA | 0.10 | 0.09 | 3.19 | 0.37 | HHsearch-2 | | IDKSSFPNILEGDG--YAQ-RVGNSWYIYNSNAIKNQQVMLPMYTN-----------NTKSLSLDLTPHTKENPNNLHILLNNYRTDKTADASKSWK-----KEE-LELANWISKNYS-INPVFRTTTLTLSGHTHKPQINITENWDENTH |
7 | 3qtjA | 0.11 | 0.09 | 3.10 | 0.63 | Neff-PPAS | | -KKLEVGSVREVDLKSGLPATKSTEVLEILDDNEHILGIRIVGG-------DHRLKNYSSTISLHSETIDGKTGTLAIESFVV-DVPEGNTKEETCFFVEALIQCNLNSLADVTERLQAESMEKKI------------------------- |
8 | 2rc6A1 | 0.10 | 0.05 | 1.70 | 0.46 | HHsearch | | LTPLVHRIVVIPPG-EDKKGYTVRLYSIASPSYEDNIEFIIKRDYNKGVCSNYMCLKPGDEVTMTGPS--G-------------------------------------------------------------------------------- |
9 | 3tsbA1 | 0.15 | 0.13 | 4.26 | 0.72 | SP3 | | VLPREVKTVLSESLQLNIPLISG-----MDTVTEADMLGIIHKNMSIEQQAEQVDKVKRSESGNSAKDKQGRLL--VGAAVGVTADAMTRIDALVKASV--------DAIVHGHKEVRAKYP---SLNIIAGNVATAEATKALIEAGA--N |
10 | 1xxoA | 0.06 | 0.05 | 2.30 | 0.53 | PROSPECTOR2 | | VFDDKLVLATIK----HDGRPQLSNVQYHFDPRKLLIQVSIAEPRATRNLRR------DPRASILVDADDGWSYAVAEGTAQLTPPAAAPDDDTVEALIA-----LYRNIAGEHSDWDDYRQAMVTDRVLLTLPI-----SHVYGLPPGMR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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