Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | PPIAFPQELQMEVDRQPVRHATQTPMMAGRRREDQMVPSMTSSFIRAETELTADFGNISEDSRPEVPSNMHLQPRTEREETVDGGTANAVRMNGNHQQHNFQNNTHRVLGVAPSVSEASSSWT |
1 | 5jcss | 0.09 | 0.09 | 3.41 | 1.14 | SPARKS-K | | VEIYIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSICIFAQVHDILLLSDEEPIEESLAAVIPISHLGEVGKWANNVLNCTEYSEKKIAERLYVFLTDMGVLEKINNLYK |
2 | 4b03D | 0.08 | 0.08 | 3.18 | 1.37 | Neff-PPAS | | --MIVSKQERGKSLLFKTSAGVNMCTLIAMDLGELCEDTMTYKCPRITETEPDDVDGEHRRDKRSVALAPHVGLGLETRTETWMSSEGAWKQIQKVETWALGHPGFTVIALFLAHAIGTSITQ |
3 | 6emkG | 0.03 | 0.03 | 1.87 | 1.10 | SPARKS-K | | SLHYASYHGRYLICVYLIQLHDKHELIKTFKGNTCVHLALMKGHEQTLHLLLQQFPRFINHRGENGRAPIMNDYYQCLSLLIGVGADLWVMDTNGDTPLHVCLEYGSIS-CMKMLLNEGDNVR |
4 | 1nwxT | 0.16 | 0.13 | 4.30 | 0.38 | FFAS-3D | | -PRRIPQELVVDVTKMNIGDHI--------TAGDIKLPE--------------GCTLAADPELTVVSVLPPRLTAEELEAEVQAAQVAGLVAAGELSEEAAEAVLEGDASLEEVKAEASE--- |
5 | 3jc5B | 0.10 | 0.08 | 2.98 | 0.21 | HHpred | | ----LPAHLQQTFSPEEIQ-------FI---VENEPIKIFPRTWQLIT-TDDKALNNMVAMRSTEVVLWIALLLKQQSPQWLTTKEIQYEKTPDRFSEPWNWLVLARLFNKA----------- |
6 | 1r5sA | 0.12 | 0.11 | 3.76 | 0.82 | MUSTER | | KYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNN------SSCRNYNKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFPDDNQNAKKVAAGHELQPLAIVDQRPSSR-----ASSRASSRP |
7 | 4bx4A | 0.14 | 0.03 | 1.11 | 0.35 | CNFpred | | ------------------------------FSEDQFFGMLEQRMQNMSDSEVAELVDR----------------------------------------------------------------- |
8 | 2pffB | 0.18 | 0.18 | 5.80 | 0.88 | HHsearch-2 | | PNTSLPPSIL-EDSLE-NNEG-VPSPMLSISNLVQDYVNKTNSHLPAGKEISKNLVNL-TLRKAKAPSGLDQSPFSERKLKFSNRFLPLVKNNVSFNAKDIQIPVDTLRVLSGSISERPVKWE |
9 | 3iykG | 0.10 | 0.09 | 3.33 | 1.24 | Neff-PPAS | | ---WVQWMMKDSMDAQPLKVGLD---DQSRNVAHSLHNCVVKIDSKKADTMSYHVEPIEDASKGCLHTRTMMW-----NHLVRIETFHAAQEVAYTLKPTYDIVVHAERRDRSQPFRQSRHDP |
10 | 6cl5A2 | 0.11 | 0.06 | 2.03 | 0.38 | HHsearch | | FPIAFPSACHVVPTVK--EV--GRP-AT--SASTVTDVSVSNTGCVIV------SSEYY-GLAQNY--------------------------------GIRVMAIGY---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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