Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DGGRHGFTPAHRTALENALPAMADRIATALPVDAHRVLVLGFEELMYAPLRLAAELERTTTAEVRYSTTTRSPVLAVDDPGYAIPPRLVFPAHDDPADGPGERYAYNVAGAGFDAVVAVVDSVADTPALHAPDGLLAR |
1 | 3iwaA3 | 0.07 | 0.06 | 2.38 | 0.77 | SPARKS-K | | ANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVKAVIVGGG---FIGLEMAVSLADMWGIDTTVVELADQIM--PGFNDVVVHTGEKVVRLEGENG---KVARVITDKRDADLVILAAG----------------- |
2 | 2amlA2 | 0.11 | 0.09 | 3.16 | 0.58 | FFAS-3D | | --------PATIAETEAFYERWQEEF-----ATAPKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEHGPYLEVNPQH----RIFFLETASAVSKYTPFTYTVKFGKGEDDRTLVIPTDLDEYQAP--------- |
3 | 3hjbA1 | 0.08 | 0.07 | 2.83 | 0.28 | HHpred | | -------VMPAVNAVLAKMKAFSERVIGGEWKAITDVVNIGIGGSDLGPYMVTEALVPYKHLTVHFVSNVD-GTHMAKNVD-PETTLFLVASKTFTTQETMT--NAHTARDWAKHFAALSTNGKAVAEFGI------- |
4 | 2z00A | 0.18 | 0.17 | 5.65 | 0.61 | MUSTER | | LLGLPGNPPEAEAARIARDLEVLRYALRRSP-ATPRLHVQHLS--TKRGLELVREAKRA-GLPVTAEATPHH--LTLTEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGTLDAIHAPHTLAEEKDLLRAPFGIPSL |
5 | 3uw2A | 0.12 | 0.08 | 2.84 | 0.61 | CNFpred | | -----------ADVARSIGRAFGSEVRAQ----GGDAVVVARDGGPELVGALADGLRAA-GVDVVDVGMVPTPVGYF-----AASVPLALSG----GERRVDSCIVVTGS-DYNGFKMVLR----------------- |
6 | 6hcyC | 0.11 | 0.07 | 2.34 | 0.29 | HHsearch-2 | | ---------------------------------QETVCIFGTGDFGR---SLGLKMLQC-GYSVVFGS--RNPQKT----T-LLPSGAEVLSY-----------SEAAK--KSGIIIIAIHREHY-DFLTELKILVDI |
7 | 2amlA2 | 0.14 | 0.12 | 4.20 | 0.76 | Neff-PPAS | | --------PATIAETEAFYERWQEEFAT-----APKFTAIGYGPTVGTCKEFETKFSETVRVPSQGLDLEHGPYLEVNP-----QHRIFFLETASAVTERLVLLRDYESKYTPFTYTVKFGKGEDDRTLVIPTDLDEY |
8 | 2jfgA1 | 0.21 | 0.13 | 4.14 | 0.25 | HHsearch | | ---------------------------AD--YQGKNVVIIGLGL---TGLSCVDFFLAR-GVTPRVMDTRMTPPGL-D----KLP----------EA---VERHTGSLNLMAADLIVASPGIALAHPSLSAAAGIEI- |
9 | 3bkxA1 | 0.17 | 0.12 | 4.04 | 0.89 | SP3 | | P------TANARTIQRRQTAHRLAIAEAWQVKPGEKILEIGQG-------DLSAVLADQVGSSGHVTGIDIASPDYGAPLTGPLGDRLTVHFNTNLSDDLGP-----IADQHFDRVV--------------------- |
10 | 1w30A | 0.15 | 0.14 | 4.65 | 0.56 | PROSPECTOR2 | | ESREL-MSAAN---VGRTISRIAHQIIEKTALDDPVVVLLGIPTRGVTLARLAGNITEYSGIHVGHGALDRDPLASTSIPAGGIDDAVLVDRGHRELPLRADYVGKNVPTSRSESVHVRLR-----EHDGRDGVVISR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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