Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | YSEQLGTLENLSPLAGLRTAELSVAMARQLWPSNPNQVAESQRWERLLQARMGNNAAGSGYFQLQRRLQALSEKLLEQEQVRGSLTISYLKTAVYQMQTELNREIPLEELLRQLSVARESHQPVSPVLLKQIDERWNALLSRYHQLT |
1 | 5cwjA | 0.15 | 0.14 | 4.61 | 0.77 | SPARKS-K | | SEEEQERIRRITEESLRQAIEDVAQLAKKS-----QDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKEILRIAKESGSEALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEESG--SEEARRQAERAEEEIRRRAQ--- |
2 | 6et8A | 0.18 | 0.17 | 5.54 | 1.02 | FFAS-3D | | -QQELQVLPFAEQDEQRNQTLELVGEAQQLGADEPRAIALATRWEQLEQDTAGRPEFLTRLNEHAIDFITRAFAESKLAIWARYLNAEELAF----TRQHYFDRLEWPALVADLHRACREKRDPASPEGQQLAQRWLALFQSYA--- |
3 | 4y66D | 0.15 | 0.10 | 3.44 | 0.33 | HHpred | | ---------------------------QNLLESDAQLMEVNAQINDL----------KAQVEKLTQQGETLRITQRNLEA---APITEVLKQEVDELRQQVS---ANDEKLRLVRE---SNAIVSDADMLTLQKNYKDAMTAWATRR |
4 | 4tqlA1 | 0.13 | 0.12 | 4.27 | 0.87 | MUSTER | | YKQMVQELEKAR-DRMEKLYKEMVELIQKA----ELMRKIFQEVKQEVEKAIEELEKLQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLI |
5 | 5j1iA | 0.08 | 0.08 | 3.20 | 0.65 | CNFpred | | LRSELELTLGKQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQAEAQQPTFDALELRGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYR |
6 | 6f1tX2 | 0.18 | 0.10 | 3.10 | 0.51 | HHsearch-2 | | ----------------------------------QHIIRLESLQAE--------------IKMLSDRKRELEHRLSATLEENDLGTVEELQDRVLI----------LERQGHDKD-----------LQLHQSQLELQEVRLSYRQLQ |
7 | 4tqlA1 | 0.12 | 0.12 | 4.30 | 0.80 | Neff-PPAS | | YKQMVQELEKA-RDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMEKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLI |
8 | 6f1tX2 | 0.14 | 0.08 | 2.78 | 0.61 | HHsearch | | ---------------------QHIIRLESLQAE---------------------------IKMLSDRKRELEHRLSATLEENDLGTVEELQDRVLILERQGH---DKDLQLHQSQ-----------LELQEVRLSYRQLQGGGGGG- |
9 | 4tqlA1 | 0.13 | 0.12 | 4.27 | 0.65 | SP3 | | YKQMVQELEKAR-DRMEKLYKEMVELIQKA---IELMRKIFQEVKQEVEKAILKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKL-LKEMKQRMEEVKKKMDDELKIKKNIDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLI |
10 | 4uosA | 0.08 | 0.08 | 3.20 | 0.64 | PROSPECTOR2 | | GDEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKLKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKVG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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