Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | LAIFHKAFANPPEELNSPASHKSTKKPKQPEETLNDFLSHHPHNTFSMSFGNAAVLAYVRHERAASVHQRLFCGFDDIYCLFLGSLNNLFMLNRQYGLSKGSNEAMFVIEAYRTLRDRGPYPADQVVKDLEGSFAFVIYDSKTGTVFAALGSDGGVKLYWGIAADGSVVISDDLDVIKEGCAKSFAPFPTGFMFHSEGGLMSFEHPMNKIRAMPRVDSEGVICGANFKV |
1 | 1ct9A1 | 0.19 | 0.15 | 4.80 | 2.59 | SPARKS-K | | FGVFD-------------IKTDAVELRKKALELSRLMRHRGPDWSGIYASAILAHERLSIVDVNAGAQP-LYNQQKTHVLAVNGEIYNHQALRAEYGQFQTGSDCEVILALYQEKGPE-------FLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAGSYLWSQGEIRSYY------------------------- |
2 | 1ct9A1 | 0.19 | 0.15 | 4.77 | 2.31 | FFAS-3D | | ---------------------DIKTDAVELRKKALELSRHRGPDWSGIYASDNAILAHERLSDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGQFQTGSDCEVILALYQEK-------GPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAGSYLWSQDGIRSYY------------------------- |
3 | 1ct9A | 0.18 | 0.16 | 5.12 | 3.20 | HHpred | | -------------SIFGVFDIKTDELRKKALELSRLMRHRGPD-WSGIYASILAHERLSIVDVN-AGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDFQTGSDCEVILALYQEKGP-------EFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAGSYLWSQDGIRSYYHRDWFDYDAKNVTDKNELR------ |
4 | 1ct9A | 0.19 | 0.17 | 5.50 | 2.05 | MUSTER | | FGVFD--------------IKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDFQTGSDCEVILALYQEKG-------PEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAGSYLWSQDGIRSYYHRDFDYDAVKDNVTDKNELRQALEV |
5 | 1ct9A | 0.18 | 0.14 | 4.68 | 1.93 | CNFpred | | --------------------TDAVELRKKALELSRLMRHRGPDWSGIYASAILAHERLSIVDVNAG-AQPLYNQQKTHVLAVNGEIYNHQALRAEYGQFQTGSDCEVILALYQEKGP-------EFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPV-CRTIKEFPAGSYLWSQDEIRSYYHRDWF-------------------- |
6 | 1gph1 | 0.18 | 0.16 | 5.27 | 2.03 | HHsearch-2 | | FGIWGHE----E-------------APQITYYGLHSLQHRGQEGAGIVATGAIGHVRYATAGGGENVQPLLFRQNGSLALAHNGNLVNATQLKQQLENFQTSSDTEVLAHLIKRSGHFTKDQIKNSLSMLKGAYAFLIMTE--TEMIVALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIINDGMERFSMNINRSIYFSRPDS--NIDGINVHA |
7 | 1ct9A1 | 0.20 | 0.15 | 4.90 | 2.97 | Neff-PPAS | | ------------------DIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNAILAHERLSDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGQFQTGSDCEVILALYQEKGPE-------FLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAGSYLWSQDGIRSYY------------------------- |
8 | 1gph1 | 0.18 | 0.16 | 5.26 | 3.27 | HHsearch | | FGIWGHE-----------------EAPQITYYGLHSLQHRGQEGAGIVATGAIGHVRYATAGGGENVQPLLFRQNGSLALAHNGNLVNATQLKQQLENFQTSSDTEVLAHLIKRSGHFTKDQIKNSLSMLKGAYAFLIMTE--TEMIVALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIINDGMERFSMNINRSIYFSRPDS--NIDGINVH- |
9 | 1ecfa2 | 0.10 | 0.08 | 3.11 | 2.11 | PROSPECTOR2 | | VGIAGV---MPVNQSDANNCFRLRKANGLVSDVFEARHMQRLQGNMGI-----GHVRYPTAGSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLRHINTTSDSEILLNIFASELDNFRHAIAATNRLIRGAYACVAMI-IGHGMVAFRDPNGIRPLVLGKENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEETRQCADNPVS-------------------- |
10 | 1gph1 | 0.17 | 0.12 | 3.89 | 2.03 | SAM | | -------------------------------YGLHSLQHRGQEGAGIVAT-AIGHVRYATAGGG-NVQPLLF-RNGSLALAHNGNLVNATQLKQQLENFQTSSDTEVLAHLIKRSGK-------NSLSMLKGAYAFLIMTE--TEMIVALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIINDGSERFSMN----------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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