Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LLRLLTATCGYKEVRQMAVQRLEMWLQNPKLTKPAQDLLMSVCMNCNTHSSEDMEVISNLIKIRLKPKVLLNHYMLCIREL |
1 | 5cwbA1 | 0.08 | 0.07 | 2.90 | 0.77 | SPARKS-K | | --------DECEEKARRVAEKVERLKREDEIAEEVAREISEVIRTLKSSYEVICECVARIVAEITSEDEIAEIVARVISEV |
2 | 5ee5A1 | 0.17 | 0.15 | 4.89 | 0.72 | FFAS-3D | | ---------GKKTKNMFLTRALEKILADSQLRKACEVALEEIKAETEKQFIEADKYFLPFLACQSKCPRIVSTSLDCLQKL |
3 | 3opbA | 0.12 | 0.12 | 4.32 | 0.28 | HHpred | | LLRLLSSACIDETMRTYITENYLQLLNVEDVQIYSALVLVKTWSFTKLTCINLKQLSEIFINAISRRVPKVEMSVEALAY- |
4 | 3opbA | 0.14 | 0.14 | 4.67 | 0.69 | MUSTER | | LLRLLSSACIDETMRTYITENYLQLLEREDVQIYSALVLVKTWSFTKLTCINLKQLSEIFINAISRIVPKVEMSVEALAYL |
5 | 4uqiB | 0.10 | 0.10 | 3.63 | 0.63 | CNFpred | | KLDIMIRLASQ-ANIAQVLAELKEYATEVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KVNYVVQEAIVVIRDI |
6 | 3qmlC1 | 0.15 | 0.07 | 2.49 | 0.36 | HHsearch-2 | | LANLSLNENLPLTLRELSTRVITSCLRNPPVVEFINESFP----------------------------------------- |
7 | 5mu7A4 | 0.12 | 0.11 | 3.96 | 0.69 | Neff-PPAS | | -LRFLCKL-REPELLEPLLSSVRACLEHAYVRKNAVFAVASIYQHAPSLIPDAADLIATFLEGE-SDPTCKRNGFAALSSI |
8 | 3zyqA1 | 0.23 | 0.12 | 3.88 | 0.46 | HHsearch | | ILDLIQGDTQAKYAVNSIKKKVND--KNPHVALYALEVMESVVKNC----------------------------------- |
9 | 5kojB | 0.15 | 0.15 | 5.00 | 0.74 | SP3 | | LLQKLSEISGLEMERGRLVDALADSQAYPDFVYGMARFILETHCLATNGSKAWEAQMQELFDSSPFGVGCLWHMRSLLATE |
10 | 2jdqA4 | 0.12 | 0.12 | 4.33 | 0.47 | PROSPECTOR2 | | AVPIFIELLSSEDVQEQATMCRDYVLDRLTMTRNAVWALSNLCRGKSPPPEFAKPCLNVLSWLFVSDTDVLADACWALSYL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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