Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MMPTTLFAGTHITMTTVYHITVSQIQLSLLKVTAFQHQNSKKTTKLVVILRIGTQVLKTMSLYMAISPKFTTSLSLHKLLQTLVLKMLHSSSLTSLLKTHRMCKYTQSTALQELLIQQWIQFMMSRRRLLACLCKHKKVSTNLCTHSFRKKQV |
1 | 7aatA | 0.10 | 0.09 | 3.42 | 0.61 | SPARKS-K | | LASVVKKRNLLAYFDMAYSGDINRDAWALRHFIEQGID--------VVLSQSYAKNMERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMF |
2 | 3qqyA1 | 0.12 | 0.09 | 3.24 | 0.58 | FFAS-3D | | ---------VGYSTELGFQITLHNKDKSILENVGVIANSGDNAVSLKVTRFEDKVIIDHFEKYPLITQKLGDYMLFKQAFCVMENEHLKINGIKELVRIKAKLNWGLTDELKKAFPFKWLAGFTSGE-------------------------- |
3 | 5lddB | 0.24 | 0.16 | 4.88 | 0.25 | HHpred | | ---------------IVYYATASHERLRLAGMVEFAKSFSEKAR--VILVEVEEG------WWILASTRVKPPSLLRADLLRALFLLHHGSSLSSLLASQG------RAQLVASLTRFWDHFLATWNV------------------------- |
4 | 5oqlA2 | 0.13 | 0.12 | 4.05 | 0.61 | MUSTER | | -DPFDL--NMEITPASTLA-VLEK-DYLKALVMAFRL-NEAGLIT--VYQAIPYTDIGLVVEQ--FPTVYVPRL-LRFVAAQTE-MEFCLLWIRALIDKHGPWLAANRGKVD-VELRVVARAVAKMRDEIRRLADE-----NVYMVDYLLNQ- |
5 | 1g7wA | 0.10 | 0.08 | 2.91 | 0.59 | CNFpred | | --------GWLPLFDFAYQGFARGLEEDAEGLRAFAAM----HKELIVASSYSKNFGLRVGACTLVAA---DSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNT----------------- |
6 | 6cknA | 0.16 | 0.04 | 1.31 | 0.49 | HHsearch-2 | | ------------------------------------------------------------------------------------------------------------ASIEQLLERQWSEFLLEQ------GTPSDILG-LKSLHQLQVENR |
7 | 5wc6M2 | 0.13 | 0.12 | 4.10 | 0.63 | Neff-PPAS | | ---------NIIFCAQRYPIPEREYISTILDILYKYAKEYK--TKVFIKLKERIETIDVYKEISKDKQGLIISFPAEDFISQLKPRKVLSIASTSLVYTTLISKDIKAISIYPLFRKEVLKKIEYKEEYFKDIESHYSLLSKFDGIRILNNTN |
8 | 6r7oA3 | 0.22 | 0.15 | 4.75 | 0.66 | HHsearch | | ----------------------SKEDLLVLRVKS---------------------FLAVCQQCLSNV---NTPVKEQAFMLLCDLLMIFSHQLMTGREGLQPLVFNPDTGLQSELLANKIEALHKRRNLLAAFSKYDIVDMHAAADIFKHYM- |
9 | 3gm1B | 0.16 | 0.14 | 4.78 | 0.50 | SP3 | | IQPTANLDRTD---DLVYLNVMELVRAVLELKNELAQLPPEGYVVVVK--NVGLTLRKLIGSVDDLLPSLPSSRTEIEGTQKLLNKDLA--ELINKMRLAQQ--NAVTS-----LSEECKRQMLTASHTLAVDAKNDAVDQAKVLANLAHPP- |
10 | 1w9rA | 0.03 | 0.03 | 1.48 | 0.56 | PROSPECTOR2 | | GSHM-------------PEKKVAEAEKKVEEAK---------------------KKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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