Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | RRLTRPKDYHAKTEQGKETNKDRICIDVLEREMRRNPMAGDACMSSHTMADDLHMKLLYLENRVAFARLFFPSEAKLAMDIAHAETTSEFAGLSASNSKGSNGNLREVDLNETPIVQNKRLLSRMEALTKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTHEEQRIKRTRFMELKDDVHKAFNKDKAEFSRSGISSSSSSS |
1 | 5cwcA | 0.15 | 0.12 | 4.13 | 0.90 | SPARKS-K | | LRERLVKICVENAKRKDDTEEARAAREAFELVREAAERAG---IDSS---EVLELAIRLIKECVENAQREISEACRAAAEAFKVAEAAKRAGITSS----------------------EVLELAIRLIKECVENAQRACRAAAEAFKRVAEAGITSSETLKRAIEEIRKRVEEAQREISEACRQAAEEFRKKAEELKRR------ |
2 | 5t4oK | 0.12 | 0.10 | 3.63 | 0.81 | FFAS-3D | | --------VAKKATSGVPGKFQTAIELVIGNGSVKDMYHGKSKLIAPLALT--IFVWVFLMNLMDLLPIDLLADVNVTLSMALGVFLILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLF---GNMYAGEL--IFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTI------------ |
3 | 4y21A3 | 0.13 | 0.08 | 2.70 | 0.27 | HHpred | | ------------------------MGDILSQ------VKGTCSSVAQDADNVLQPIMDLLDSNLTFAKICEKTVLKRVLKEL--------------------------------------WKLVMNTMERTIVEAKSLTPKQCAVVELALDT-IKQYFHAGVGLKKTFLEKSPDLQSLRYALSL-YTQATD-------------- |
4 | 5cwmA | 0.12 | 0.12 | 4.11 | 0.74 | MUSTER | | ----DPEDELKRVEKL------KEAEELLRQAKEKSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALVRVAELLLRIAKESGSEELERALRVAEEAARLAKRVLELQGDPEVALRAVELVVRVAELLLRIAKE-LERALRVAEEAARLAKRVLELAEKGDPEVARRAVELVKRVAELLERIARESSEEAKERAERVREEAR |
5 | 2pftA | 0.10 | 0.08 | 2.89 | 0.63 | CNFpred | | -----------------------DFMNVYYQIRSSQ-----LDRSIKGLKEHFRVETDAYIHCVSAFVKLAQSEYRLLMEIIPEHQKKTFDSLIQ----------------DALDGLMLEGENIVSAARKAIIRHDFSVLTVFPILRHLKQTKPEFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPDKEYNMPK |
6 | 1vt4I | 0.19 | 0.19 | 5.96 | 0.58 | HHsearch-2 | | RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNQVFAKYNVSRL----QPYLKLRQALLELDVCLSYKVNSPETVLEMLQIDPNWTSRSDHSSNIKKSKPYENCLLVLLNVQRFKQVTDFLS--AATTTHISLDHHSMTLTPEVLLKYLDCDLPRE--VLTTNPRNWKHVCDKLTTIIESSLNAEYRKMFD-RLSVFPPSAHIS |
7 | 5cwmA | 0.11 | 0.11 | 4.01 | 0.89 | Neff-PPAS | | --LKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEG-DPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIAKESLERALRVAEEAARLAKRVLELAEKGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEA |
8 | 2etdA | 0.19 | 0.08 | 2.67 | 0.42 | HHsearch | | NQLQRRAGYAAIANAIGATPQESAADAELSSALSRLLAIAENYPNADANFRQL-DELAGTENRIAVARRDYNEAV----YNTAI-------GFEE-Q-------YFEAP------------------------------------------------------------------------------------------------ |
9 | 3pjrA | 0.12 | 0.11 | 3.95 | 0.70 | SP3 | | QFV--AGRIREAVERGERRYRDRVMEEMLLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANDLSLLRIIGASTIDKLVRYAADHELSLFEALGELEMIGLGAK---------AAGALAAFRSQLEQWTQLQEY-----VSVTELVEEVLDKSREMLKAERTIEAQSRLENLDEFLSVTKHFENVLIAFLTDLALISDLDETEQA |
10 | 5cwpA | 0.14 | 0.13 | 4.36 | 0.76 | PROSPECTOR2 | | MSIERAKEAAERAQEAAERTGDKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEEVRELARELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEADPEVRELARELVRLAVEAAEEVEEVNEALKKIVKAIQEAVE---SLREAEESGDPEKREKARERVREAVERAEEVQR-----------DPSGWLE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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