>PF12297 (424 residues) GDAFAVSYTATLQAGDIWNGESLKLPAQLTFQSSSQNRTQLKALFTITAEENIRVLPNHG LHAAGFFFAFLLSLVLTWAALFLMVRYQCLQGNVLTRRRVWQHESKLEPLPFTSADGVSE DLSLNDQMIDILSSEDPGSMLQALEELEIATLNRADADLEACRTQISKDIIALLLKNLTS SGHLSPQVERKMSAIFKKQFLLLENEIQEEYDRKMVALTAECDLESRKTMENQYQREMMA MEEAEELLKRASERSAVECSNLLRTLHGLEQEHLRKSLALQQEEDFAKAHRQLAVFQRNE LHSIFFTQIKSALFKGELKPEAAKMLLQNYSKIQENVEELMDFFQANKRYHLSKRFGHRE YLVQNLQSSETRVQGLLSTAAAQVTHLIQKHERAGYLDEDQMEMLLERAQTEVFSIKQKL DNDL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | GDAFAVSYTATLQAGDIWNGESLKLPAQLTFQSSSQNRTQLKALFTITAEENIRVLPNHGLHAAGFFFAFLLSLVLTWAALFLMVRYQCLQGNVLTRRRVWQHESKLEPLPFTSADGVSEDLSLNDQMIDILSSEDPGSMLQALEELEIATLNRADADLEACRTQISKDIIALLLKNLTSSGHLSPQVERKMSAIFKKQFLLLENEIQEEYDRKMVALTAECDLESRKTMENQYQREMMAMEEAEELLKRASERSAVECSNLLRTLHGLEQEHLRKSLALQQEEDFAKAHRQLAVFQRNELHSIFFTQIKSALFKGELKPEAAKMLLQNYSKIQENVEELMDFFQANKRYHLSKRFGHREYLVQNLQSSETRVQGLLSTAAAQVTHLIQKHERAGYLDEDQMEMLLERAQTEVFSIKQKLDNDL | |||||||||||||||||||
1 | 5h7cA | 0.12 | 0.11 | 3.72 | 1.04 | SPARKS-K | --------------------------KFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDKIVKELAELAKQSTDS--------------ELVNEIVKQLAATDKELVIYIVKILAELAKSELVNEIVKQLAEVAKELVIYIVKILAELAKQSTD--SELVNEIVKQLEEVAKELVEHIEKILEELEQQSAFYEILSLPNLNE------EQRNAFIQSLKDDP-SQSANLLAEAKSLNVNQAVKQLAEKAKEEVIEIVKELAELAKQELVNEIVKQLAEVAKEAT-DKELVIYIVKILAELAKQSSELVNEIVKQLAEVAKEAKELVIYIVKILAELAKQSTD--SELVNEIVKQLEEVAKEATD-----KELVEHIEKILEELKKQS---- | |||||||||||||
2 | 2tmaA | 0.15 | 0.10 | 3.32 | 1.69 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------IKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDE----LDKYSEALKDAQEKLELAEKKA-TDAEADVASLNRRIQ-LVEEELDRAQERLATALQKLEEAEKAA-DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVII-ESDLERAEERAELSEGKCAELEEEIKTVTNNLKSL-----EAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSI--------DDLEDELYAQKLKYKAISEELDH-- | |||||||||||||
3 | 5h7cA | 0.13 | 0.11 | 3.94 | 1.08 | MUSTER | ----------------------------------KFNKEQQNAFYEIL-------LPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDKEEKELAELAKQSTDSELVNEIVKQLA----EVAKEATDKELVIYIVKILAELAKQSSELVNEIVKQLAEVAKEATD--KELVIYIVKILAELAKQSDSELVNEIVKQLEEVAKEADKELVEHIEKILEELEQQSAFYEILSPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEADKEEVIEIVKELAELAKQST--DSELVNEIVKQLAEVAKEADKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEA-KELVIYIVKILAELAKQSTDSVKQLEEVAKEADKELVEHIEKILEEL | |||||||||||||
4 | 5h7cA | 0.10 | 0.09 | 3.38 | 1.32 | Neff-PPAS | ------------------------------------NKEQQNAFYEILHLPNLN-----EEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIELAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEAT--DKELVIYIVKILAELAKQSDSELVNEIVKQLEEVAKEADKELVEHIEKILEELEQQSAFYEILSPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEATDKEEVIEIVKELAELAKQST-DSELVNEIVKQLAEVAKEADKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEADKELVIYIVKILAELAKQSTDSVKQLEEVAKEADKELVEHIEKILEEL | |||||||||||||
5 | 6gy6B | 0.10 | 0.07 | 2.72 | 1.44 | PROSPECTOR2 | YP--------------------------------EIN----------------------------------IKAMNQAVNTIWLLAQR----------------------------QTSGIEIINDKVKRIS------AYSREFDEMMRDSLAQLAPVLKQLTSDAAFQTIAQI-DEALADPSLSKDDREALTLERNNLIQNLSKHI-DNVIVSFTGRTSKLTNKISQDLVTQTESQKTELQSDIDPKTEKRNKLDADREKIIESQDVIRQNNIADMFKDIDGLDFTQPKKEAIKQAIKQGAEIARKILGKVSE-----GLKYIDLADARMKLSDQIDQLITETDELKAKI--REVELRLSGLKDVMQIDTERTTLLTEAVKIEQVWISHKLSNDEINQQDLSNLINGQLDFLNNLTLQYNKLK | |||||||||||||
6 | 4dylA | 0.12 | 0.09 | 3.06 | 1.61 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------GFSSELCSPQGHGVLQ-----QMQEAELRLLGMRKWMAQRVKSDREYAGPISQSWAEITSQTEGLSRLLRQHAEDLNSGPLSKLSLLIRERQQLRKTQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKYDKDKYVRSLWKLFAHHNRYVLGVRAAQLHHQHHHQLLLPGLLRSLQDLEMACILKEILQEYLEISSLVQDEVVAIHREMAAAAARIQPEAEESVQHTLTSVTDELAVATEMVFRRQEMVTQLQQELRNEEENRVQLLGKRQV----LQEALQGLQAKLQAQQELLQTKLEH-- | |||||||||||||
7 | 5xjcI | 0.08 | 0.08 | 3.15 | 1.30 | Neff-PPAS | FDSYEESMIAAKMETASEEEEDDV-DLELRLARFELISRRPLLLNSVLLRQNHHVHEWHKRVALGRPREIINTYTEAVQPFKATGKPHTLWKFYEDNGQLDDARVIATKVNFKQVDDLASVWCCGELELRHENYDEALRLLRKATL-PARRAEYFDGSEPVQNRVYKSLKWSMLADLEESLGTFQS--YDRILDLRIATPQIVINYAFLEEHKYFEESFKAYESLFKWPNVSDIWSTYLGGRKLERARDLFDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIAEIYGVTHTRGIYQAIYSTWKDFEVRHGNEDTIKEMLRIRRSVQATYFMASQMLKVSGSATGTVAPGQSGMDDMKLLEQRLAAEAERDQPLRAQSKL-FVRSDASREELAELAQQVNPEEI | |||||||||||||
8 | 6ek4A | 0.10 | 0.08 | 2.79 | 1.40 | PROSPECTOR2 | VV-----------------------------------------------------YPEINVKTLSQAVKNIWRLSHQ---------------------------------------QKSGIEIIQEKTLRIS------LYSRDLDEAARASVPQLQTVLRQLPPQDYFLTLTEIDTEL-EDPELDDETRNTLLEARSEHIRNLKKDVKGVIRSLRKEANLMASRIADESSLKEEQERKAEIQADIAQQEKNKAKLVVDRNKIIESQDVIRQYNLADMFKDLDKLDLANPKKELIKQAIKQGVEIAKKILGNI--SKGLKYIELADARAKLDERINQINKDCD-DLKIQLKGVEQRIAGIEDVHQIDKERTTLQAAKLEQAWNIFAKQLQNTIDGK-IDQQDLTKIIHKQLDFLDDLALQYHSML | |||||||||||||
9 | 6irdB | 0.10 | 0.06 | 2.16 | 1.61 | FFAS-3D | ----------------------------------------------------------------------------------------------------------------------------------------------RIEDLKLAHLAAQQAELNSLKAAHAAEHSTMQKLH--------CTQVDKIVAQYDKEKSTHEKILEKAMKKC-LEIKKETEIKIQTLTTDHKSKVKEIVAQHTKEWSEMINTHSAEEQEIRDLHLSQQCELLRKLLINAHEQQTQQL-KLSHDRESKEMRAHQAENSKAISQDKSIKNK------AERERRVRELNSSNTKKFLEERKRLAMKQSKEM------DQLKKVQLEHLEFLEKQNEQAKEMQQM--------------VKLEAEMDRR------- | |||||||||||||
10 | 6f1tX | 0.09 | 0.06 | 2.32 | 1.24 | Neff-PPAS | --------------------------------------------------------------------------------------------------------------------------------------------VIRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLD-QLSRASEVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |