Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | YPGVNTKFVGRVEEQGVWSERCTGCGDCLLDKTGGICPIARCAKSLLNGPCGGSKNGKCEINPDIDCAWQLIYDRLKELGQLDKLEEIIPIKDWS |
1 | 1vk1A1 | 0.11 | 0.09 | 3.39 | 0.96 | SPARKS-K | | YPAFGDVVIERLKAEGLEVIEDEKAEE-AEGEIAFALIGEKSFAIP-----GGLEEQK---------V-SKVLDEMDQYGLKEDAKADMEKGEID |
2 | 2b76B2 | 0.18 | 0.13 | 4.12 | 0.40 | FFAS-3D | | ------------------FSGCINCGLCY-----AACPQFGLNPEFIGPAC--TFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKPR--- |
3 | 1hfeL | 0.27 | 0.19 | 5.82 | 0.31 | HHpred | | ------IFGEMGEHSIPHIEACINCGQCLTH-----CPEAIYEASLKDG----KVKCIAMPAPAVSVTTGKMLAALQKLGFA------------- |
4 | 1zlgA | 0.17 | 0.15 | 4.85 | 0.85 | MUSTER | | LQITRISAFFQHFQNNGSLVWCQNCSKCLEPKESGDLRKHQCQSFCEPL--FPKKSYEC----LTSCEF------LKYILLVKQGDCPAPEKASG |
5 | 2h5yA | 0.21 | 0.06 | 2.00 | 0.57 | CNFpred | | ----------------------------------------------------------AVGQTASVPAGKYAAAALRKLGQWDSVS--------- |
6 | 5an9G | 0.16 | 0.11 | 3.52 | 0.42 | HHsearch-2 | | ----------------MKTSLCNYSEFKIYPARGMKFVRG-------DSKVFHFINTKVESLNPRDIRWSMVYRRIYKNTTTDVSAK-------- |
7 | 2wdqB2 | 0.18 | 0.15 | 4.80 | 1.10 | Neff-PPAS | | PPAREHLQMPEQREKLDGLYECILCACC-----STSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDT----ETDSRLDGLSDAFSV--------FR |
8 | 2k3jA | 0.28 | 0.16 | 4.83 | 0.53 | HHsearch | | -------------------------GL-ILPNINWNCP---CLGGMASGPCGEQKAFSCFHYKGSDCVDQFRAMQMQKYPDLY------------ |
9 | 2zvsA | 0.15 | 0.09 | 3.21 | 0.78 | SP3 | | --------------ALLITKKCINCDMCE-----PECPNTECVGHYETPTCQKVIPNTIVKDPAHVETEEQLWDKFVLMHH-------------- |
10 | 1wevA | 0.12 | 0.11 | 3.75 | 0.44 | PROSPECTOR2 | | GSSGSSGADDFAMEMGLA---CVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVC--ARCTRQMKRMAQ----KNQKSGPSSG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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