Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MKLLIVFGLLTSVYCIHKECSIQECCENQPYQIEDPCPIHYYSDWFIKIGSRKSARLVQLCEGDYGKRIPIHYEMFGNYTISCEPLEINCQAPPVGSLIVRCSYDYDFVEHHDVRVVL |
1 | 2quoA | 0.07 | 0.06 | 2.46 | 0.70 | SPARKS-K | | -------KEILDLAAATERLNLTDALNSNPWRSSNSYPWTQKLNLHLTITATGQKYLAS-------KIVDFNIYSNNVKLEQSLGVDISLD---AGQYVLVMKANSSYSGNYPYSILF |
2 | 3rg1C | 0.17 | 0.14 | 4.75 | 0.32 | FFAS-3D | | ----------------HTACLYQSCDPLQDFGFSDQCARQLKPNINIRFGMVLREDIEQVCEVDLPKFSFCGRRKGEQIYYAGPINNPGFEIPEGDYQVLLELYNQDHATVACANATV |
3 | 2l9yA1 | 0.11 | 0.08 | 2.75 | 0.23 | HHpred | | ---------------------FSGSSRDDGARLRAECRRGD--------GGYSTSVILNRYLSNDNGHF--RWVSAGNFWDSARDVRLV---DGGKVLEAELRY--SG-GWNRSRIYL |
4 | 4qenA2 | 0.16 | 0.15 | 5.07 | 0.62 | MUSTER | | NDGRLIESRDVVFEC-GPHCGCGPKCVNRTSQKRLRFNLEVFRSAKKGWAVRSWEYIPAPVCEYIGVVRRTADVNEYIFEIDCPEFCIDAGEP----LFVQCVLS-SHQDIRLARVVL |
5 | 1s9cA | 0.14 | 0.09 | 3.19 | 0.60 | CNFpred | | --KPILHGLCTFGFSARR--VLQQFADNDVSRF---------KAVKARFA-----KPVYP-----GQTLQTEMWKE----GNRIHFQTKVQE-TGDIVISNAYVDLA----------- |
6 | 1l5bA | 0.08 | 0.06 | 2.33 | 0.43 | HHsearch-2 | | -----LGKFSQTCYNSAIQ----------GSVLTSTCERTNGG-Y-------NTSSILNSVIENVDGSL--KWQP-SNFIETCRNTQLAG----SSELAAECKTRA-Q-QFVSTKINL |
7 | 4lgqA | 0.07 | 0.07 | 2.81 | 0.62 | Neff-PPAS | | TSKAVIQRFNREVIENGDAAFAELVAPD--FVNHSAPPGVSPGPDGFAGFFTGLHPALSDIRVHIHEQIEENGKVVTRKTIEATHTGAFFGQPASGKRIAIHADIVVVRDGKYAEHWS |
8 | 1l5bA1 | 0.14 | 0.04 | 1.44 | 0.33 | HHsearch | | ---------------------------------------------------------------------------LGKFSQTCYNSAIQ-----GSVLTSTCERT-NG-GYNTSSID- |
9 | 3h8iA1 | 0.13 | 0.11 | 3.84 | 0.55 | SP3 | | TKVLVLFGALTAAYTLKRLVG----SKADVKVINKSRFSYFRPALPHVAIGVRDVD-------ELKVDLSEALPEKGIQFQEGTVEKID---AKSSMVYYTKPDGSMAEEEYD-YVI- |
10 | 5ts4A | 0.09 | 0.08 | 2.92 | 0.49 | PROSPECTOR2 | | MSEEAKIAIELFKEAMKDPERFKEMCSPDTRIESNG----------QEYRGSEECKKFAEEMKKTEVRVE-------RYRSDGDRFEIELRVNKTFRMEIRMRKVNGEFRIEEMRLHG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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