Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFVSWLCALAIPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG |
1 | 3jbrE | 0.07 | 0.07 | 3.02 | 1.16 | SPARKS-K | | TAVVSDHWAVLSEFTTQKEYSISAAAISVFSLGFLIMGTICALMFRKKRDYLLRPASMFYVFAGLCLFVSLEVMRQSVKRMIFACACAAFVLLFLGGISLLLFSLPR |
2 | 3rceA4 | 0.16 | 0.13 | 4.37 | 1.03 | MUSTER | | YFNV-------NETIMEVNTIDP---EVFMQRIS-----SVLVFILSFIGFILLCKDHKSMLLALPMLALGFMALRAGLR--TIYAVPVMALGFGYFLYAFFNFLEK |
3 | 5d0yA | 0.11 | 0.11 | 4.03 | 1.16 | SPARKS-K | | LAMVIAIKVVLGQFKVGDATLQVGLGFIGSVMLGYLFGPWWGFAGGALSDLVSSAIFGGFFIGFTLTAALESMIYGFFLPIQIWRVIASVICVTVILNTLWVSMLGG |
4 | 6mjpF | 0.10 | 0.07 | 2.80 | 0.75 | FFAS-3D | | ----------------------YLIRETIKSQFAIFFVLFLVFLSQKFIILSIVGLNMPAMGLMLPLSLYIGILLRLYAESEITKFLIRAALYLALITASVAAFNA- |
5 | 6iu3A | 0.14 | 0.12 | 4.12 | 0.26 | HHpred | | ----------KFELGLEKPDPKRALQSAFTIAIAYVLGGLVPLIPYMFIP----VARKAVVASVILALLIFGYAKGYFTDNKPFKSALQTALISAAAFGMAKAV--- |
6 | 1nekD | 0.13 | 0.11 | 3.91 | 0.98 | MUSTER | | ----SNASALGRNGVH-----DFIL-AIVLTLYIIYMVGFFATS--GELTYEVWIGFFAAFTKVFTLLALFSILIHAWI-LRLMLQLVIVVALVVYVIYGFVVVWGV |
7 | 5oqtA | 0.12 | 0.09 | 3.28 | 0.85 | CNFpred | | -------------------------IGAIIGTGIFVLTGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVS-GSAYTYSYATFGELIAWILGWDLILEYG |
8 | 6hwhX | 0.20 | 0.14 | 4.50 | 0.57 | HHsearch-2 | | ARRLDTRPEDYED--AEISDG-----AGELGFFA-------------PHS------WWPILISLSFSTAAVGAAL-----WLPWLIAAGVAFVITSVCGLVFEYYWG |
9 | 5xjjA2 | 0.14 | 0.13 | 4.49 | 0.86 | Neff-PPAS | | ---RNIIGYAFSNSKEVVDYVADLSPLLCLSFILDGFTAVLNGVARGSG--WQHIGAWNNIFSYYLVGAPVGVYLAFRHDLNGKGLWCGVVIGSTVQATVLAIVTAS |
10 | 1oczC1 | 0.11 | 0.07 | 2.36 | 0.32 | HHsearch | | MT-------HQTHAYHMVNPSP-----------------------------------WPLTGALSALLMTSGLTMWFHFNSMTLL-MIGLTTNMLTMQWWRDVIFQ- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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