Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | VALTGCSQTTDGKAYPVGGAPTPTTDAYVAQGDQPGRQFRNLLTECDTVTDEEITKAVGGEDIQRIFFGAICRWDVTGSSGSIKVTFNWFENGSLEVERATLDKLKYIVTETNIQGRRALQEQRPNDPDSCGVTAGAPDSGIIGWWVQYVPGFPHGDPCAAATKLTELTL |
1 | 2i8gA | 0.13 | 0.10 | 3.47 | 1.01 | SPARKS-K | | -----------------------VHDSALPFDALPPPQGREGFEECPYLDSQWVADTNGQRTGQTRFDTPACVFWSYPEAPQATVVRH----PSEEEAIRVVDWAIDTTEPAEEPGWSGGRAGHEE-----GAVYAVQKGPVAVVVWSNQQQS------LKAEL-AKEAI |
2 | 4esqA | 0.08 | 0.06 | 2.36 | 0.62 | FFAS-3D | | ----------------------------------HQPVAEERLS-ALLLNSSEVNAVMGSSSSPVTVSLPDCISSEPGDNYEHWVNQAVVAFPTVQTSADKWKNCAGKTVTVTNKAKTVIDTQEGAEGWECQRAMSVANNVVVDVNACGYQ--ITNQAGQIAAKIVDKV- |
3 | 2i8gA | 0.13 | 0.09 | 3.29 | 0.28 | HHpred | | --------------------------SALPFDALPPPQGREGFEECPYLDSQWVADTNGQR-TGQRFDTPACVFWSYPEAPQATV---VRH-PSEEEAIRVVDWAADTTEPAEEDGWSGGRAGH---EE--GAVYAVQKGPVAVV-VWSNQ-----QQSLKAEL-AKEAI |
4 | 2i8gA | 0.13 | 0.10 | 3.49 | 0.77 | MUSTER | | -----------------------VHDSALPFDALPPPQGREGFEECPYLDSQWVADTNGQRTGDTRFDTPACVFWSYPEAPQATVVRH----PSEEEAIRVVDWADTTEPAEEPDGWSGGRAGHEE-----GAVYAVQKGP-VAVVVWSNQQQSL--KAELAKEAIARLG |
5 | 2i8gA | 0.11 | 0.07 | 2.56 | 0.95 | CNFpred | | --------------------------------------------ECPYLDSQWVADTNGQRMTGQGV-TPACVFWSYPEAPQATVMVRHMP--SEEEAIRVVDWAAPTTEPAEEDGWSGGRAGHE---EGAVYAVQK---GPVAVVVWSNQ-----QQSLKAELMAKEAI |
6 | 6btmB | 0.11 | 0.10 | 3.59 | 0.47 | HHsearch-2 | | GIFVVGSA-ALAGGSYKAKSSGELVLYTKTGMEFPDPITRVSWDNYVTVSNADAKKFNLLNGSATTTDGNKLVIVQPGQAGTVGLAVGYGRKA-ALKE-EMQ------------VGINAYALYKNF-N-S-VQSITLAKAGEHEFACVQGQKRGGCGACVIACHA-ENNV |
7 | 2i8gA | 0.13 | 0.11 | 3.66 | 0.99 | Neff-PPAS | | ------------------------HDSALPFDALPPPQGREGFEECPYLDSQWVADTNGQRTVDTRFDTPACVFWSYPEAPQATVVRHPSEEEAIRVVDWAAPIDTTEPAE-EPDGWSGGRAGHEE----GAVYAVQKGPVAVVVWSN----QQQSLKAELAKEAIARLG |
8 | 2i8gA | 0.12 | 0.09 | 3.30 | 0.54 | HHsearch | | -------VHDSALPF----------------DALPPPQGREGFEECPYLDSQWVADTNGQRTGQGRFDTPACVFWSYPEAPQATV-V--RH-PSEEEAIRVVDPI-DTTEPAEEDGWSGGRAGH---EE--GAVYAVQKGPVAVVVWSNQQ------QSLKAEL-AKEA- |
9 | 4aq1A3 | 0.15 | 0.10 | 3.39 | 0.62 | SP3 | | ------------------EVPVQVQNQGFTLVDNLSNAPQN------------TVAFNKAEKVTSMFAG------ETKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIATAAINGSELLVTANAGQSGKASFEVTFKDNTKRTFTVDVKKEP----------------- |
10 | 4esqA | 0.09 | 0.08 | 3.10 | 0.62 | PROSPECTOR2 | | ------------GHQPVAEEGSSSMQPGKPITSMDSSPVTVSLPDCQGALYTSQDPVYAGTGYTAINGL---ISSEPGDNYEHWVNQAVVAFPTADKARAFVQTSKAKTYRWTFADVKVIDTQEGAEGWECQRAMSVANNVVVDVNACGYQITN------QAGQIAAKIV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|