Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | LVPGAWVRHPDQPDWGLGQVQSAIRNRITVNFEHAGKVLIDSDVIALTVV |
1 | 5dmaA | 0.21 | 0.20 | 6.34 | 2.46 | SPARKS-K | | WKVGDRANHRK---WGIGTVVSVRGGELDIAFPPIGIKRLLAKFAPIEKV |
2 | 5dmaA | 0.21 | 0.20 | 6.34 | 1.03 | FFAS-3D | | WKVGDRANHRK---WGIGTVVSVRGGELDIAFPSIGIKRLLAKFAPIEKV |
3 | 5dmaA | 0.21 | 0.20 | 6.34 | 1.07 | HHpred | | WKVGDRANHRK---WGIGTVVSVRGGELDIAFPSIGIKRLLAKFAPIEKV |
4 | 5dmaA | 0.21 | 0.20 | 6.34 | 3.26 | MUSTER | | WKVGDRANHRK---WGIGTVVSVRGGELDIAFPSIGIKRLLAKFAPIEKV |
5 | 5dmaA | 0.21 | 0.20 | 6.34 | 1.00 | CNFpred | | WKVGDRANHR---KWGIGTVVSVRGQELDIAFPSIGIKRLLAKFAPIEKV |
6 | 5dmaA | 0.21 | 0.20 | 6.34 | 1.43 | HHsearch-2 | | WKVGDRANHRK---WGIGTVVSVRGGELDIAFPSIGIKRLLAKFAPIEKV |
7 | 5dmaA | 0.21 | 0.20 | 6.34 | 3.07 | Neff-PPAS | | WKVGDRANHRK---WGIGTVVSVRGGELDIAFPSIGIKRLLAKFAPIEKV |
8 | 5dmaA | 0.20 | 0.18 | 5.78 | 1.74 | HHsearch | | WKVGDRANHRK---WGIGTVVSVRGGELDIAFPSIGIKRLLAKFAPIEK- |
9 | 5dmaA | 0.21 | 0.20 | 6.34 | 0.62 | PROSPECTOR2 | | WKVGDRANHRK---WGIGTVVSVRGGELDIAFPSIGIKRLLAKFAPIEKV |
10 | 5dmaA | 0.21 | 0.20 | 6.34 | 0.51 | SAM | | WKVGDRANHRK---WGIGTVVSVRGGELDIAFPSIGIKRLLAKFAPIEKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|