Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | FAAVVAGAGLFAVATPAEARDYPYCLTSPGYGYPGECRYASYGQCRAAASGRLADCIVNPRAAFREPRHRD |
1 | 3ln6A3 | 0.10 | 0.08 | 3.17 | 1.06 | SPARKS-K | | -FGDEFTDRKEALNYFSQIQDKPIVVKPKSTNGLGISIFANLASYEKAIDIAFTEDSAILVEEY------- |
2 | 1zt5A | 0.17 | 0.15 | 5.11 | 1.10 | MUSTER | | RIELYRVVESLAKAQETSGEEIS---KFYLPNCNKNGFYHSR-QCETSMDGEAGLC-VYPWNPGSPEIRGD |
3 | 3j0fI2 | 0.16 | 0.11 | 3.75 | 1.48 | SP3 | | ATVAMMIGVTVAVLCACKARRE--CLTPYALAPNAVIPTSLALLCCVRSANA------------------- |
4 | 4nssA | 0.15 | 0.15 | 5.18 | 0.96 | SPARKS-K | | RAQLAEAVRLTARTLAAVAPGASVEVRVPPFVAPPNVVETDARTWLLLATGLLDIADAGASVQMSGSRAAE |
5 | 4epoG | 0.10 | 0.10 | 3.61 | 0.36 | FFAS-3D | | MQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIEC---PICRKDILVLD- |
6 | 2ddjA | 0.14 | 0.07 | 2.42 | 0.18 | HHpred | | ------------------SPLLQQCHPFVYGGEGNGNNFHSRESCEDACPVVDHH---------------- |
7 | 5k6dA | 0.12 | 0.11 | 3.99 | 0.98 | MUSTER | | KVSERCLKGHGKFQADQEIGNGLATAKGQCKGTDSDQK-KCDKHCTGVCLGSGGSCGD---GSSQKPNKED |
8 | 4bkxB | 0.10 | 0.07 | 2.59 | 0.57 | CNFpred | | FEFCQLSTGGSVASAVKLNKQTDIAVNWAG-EASGFCYVNDIVLAILELL--------------------- |
9 | 3fkyC | 0.11 | 0.11 | 4.03 | 0.47 | HHsearch-2 | | HEAAKLF-AAHKDEEIWFGLEQEYTLFDMYDGAGCHANVSTKEQAIEKLYGRRPASNIDPYLVTGIMCENA |
10 | 1q35A2 | 0.13 | 0.13 | 4.38 | 0.87 | Neff-PPAS | | SYNVSLFAAMIEHYGIEKTKAFLEGLKANLARKPQG---GDRDQVKAIKEGICDYSIGNSYYYGKMLDDEK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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