>PF12070 (517 residues) HLLDKSKNLFNGLRDLPQYGHKQWQTYFGRTFDVYTKLWKFQQQHRQILDTKYGLKRWQI GEIASKIGQLYYHYYLRTSETNYLNEAFSFYSAIRGRAYYSRASKEDRSDLMVKKLRYYA RFIVVCLLLKKMKLVRDLVMELDKQIVDYTSTYEPDDQLEWSLVLDEIKSFIKADGIVSV LHADSNTIVLSHRLSPLTTPPVEKSTIMNLSLQEIVIIGNCSDQVKFSELTMDMFRMLQT LEREPQEDYNHLYDSPAPGRVPFEKSYSVSSAKGGVGYPAMVMCQENGDRPSKRENPHKY LLYKPTFSQIMVFLASGFKELPANGALLLYISADGCFGSTKHPEDMGYDLGGVVTNSKRE ADHSNKKGAHTKDMHCLYPGDLYPFTRKPFFVIVDSDNSFVFQHLPRYFGQPLVILMSPQ DIPPNFHEQQHNGNLFTMFLHSPLTAFCYICNITNVPIHHWERCQSFIDRFVTEASRLLT RSRIDPVYLQFFGDDFLRLLVLRYVFCDIALHLHRSF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | HLLDKSKNLFNGLRDLPQYGHKQWQTYFGRTFDVYTKLWKFQQQHRQILDTKYGLKRWQIGEIASKIGQLYYHYYLRTSETNYLNEAFSFYSAIRGRAYYSRASKEDRSDLMVKKLRYYARFIVVCLLLKKMKLVRDLVMELDKQIVDYTSTYEPDDQLEWSLVLDEIKSFIKADGIVSVLHADSNTIVLSHRLSPLTTPPVEKSTIMNLSLQEIVIIGNCSDQVKFSELTMDMFRMLQTLEREPQEDYNHLYDSPAPGRVPFEKSYSVSSAKGGVGYPAMVMCQENGDRPSKRENPHKYLLYKPTFSQIMVFLASGFKELPANGALLLYISADGCFGSTKHPEDMGYDLGGVVTNSKREADHSNKKGAHTKDMHCLYPGDLYPFTRKPFFVIVDSDNSFVFQHLPRYFGQPLVILMSPQDIPPNFHEQQHNGNLFTMFLHSPLTAFCYICNITNVPIHHWERCQSFIDRFVTEASRLLTRSRIDPVYLQFFGDDFLRLLVLRYVFCDIALHLHRSF | |||||||||||||||||||
1 | 5mqfM | 0.09 | 0.08 | 3.21 | 1.05 | Neff-PPAS | APKPRLNQLYERALKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFMHKMPRLWLDYCQFLMDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVND-ERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAA------------KMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPRENTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPAR-------RAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKL | |||||||||||||
2 | 5mqfM | 0.08 | 0.07 | 2.95 | 1.09 | PROSPECTOR2 | FSVKCWLRYIEFKQGAP----------KPRLNQLYYKLWYRYLKARRAQVKHRCVTDPAYEDVNNRLWLDYCQFLMDQGRVTHTRRTFDRAHSRIWPLYLRFLRSHPLPETAVRGYRSAEEYIEYLKSSDRLDEAAQRLATVVND-ERFVSKAGKSNYQLW----HELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREQTVDPFK---ATGKPHTLWVAFAKFYEDNGLDDARVILEKATKVNFKQVDDLASVWCQCGELELRHENPARRAEYFDGSEPVQNRVYKSLKVWSMLADLLDLRIATPKAYERGISLFKWPNVSDICPPKYAKTLTRAVEPAQQYDMFNI--YIKRAAEIYGVTHTRGIYQKAIEHAREMCLRFADMECKLGEIDRARAIYTTGAFWQTWKDFEVRRSVQATYTQV | |||||||||||||
3 | 5wtjA1 | 0.11 | 0.10 | 3.53 | 0.86 | SPARKS-K | KVLPEILNLYRNNKNEPFDTIETEKIVLNALIYVNKELYKKLILFLQELKKTLGNIDENIIENYYKNAQISASKGNNKAIKKYQKKVIECYIGYLRKNYLFDFSDFKNIQEIKKQIKDFEYIISIFALLNSNAVINKIRNRFFATSVWLNTS----EYQNIIDILDEIQLNTLRNECITENWNLNLEEFIQKKEIEKD------FDDFKIQ----------TKKEIFNNYYEDIKNNILCDVLEKKLEKIKFEIDKKS-NILQDEQRKLSNINKKDLKKKVDQYIKDKDQEIKSKILCRIIF---NSDFLKKYKKEIDNLIED----------------ESENENKFQE----IYYPKERKNEL-----------YIYKKNLFLNIGNPNFLIIKADAKAILKNLNDKLN----------GYDDFFAKNIQNKN-YKSFRVSEYKKIRDLVEFN-----YLNKIESYLIDINWKLAIQFERDEINESIRNYISHFYIVRRVSNLLTYASVFEVFKKD | |||||||||||||
4 | 5xwpA1 | 0.13 | 0.12 | 4.03 | 0.86 | FFAS-3D | ---SKRNIIYDYYRE-----SAKRDAYVSNVKEAFDKLYKEEDIAKLVLEIETKLEKYKIREFYHEISQVFYKYYLDKEELNDKNIKYAFCHFVEIESQLLKNYVYKRSNDKIKRIFEYQNLLIENKLLNKLDTYVRNCGKYNYYLSDFIARNRQNEAFLRNIIVSSVAYFSLRN----ILETENENDITGRRGKTVKNNKGEEKYVSG--EVDKIYNENKKNEVKIEDFFANIDEAISSLELEGKDIFAFKNIAPSEISKKFQNEINILKYTERLN-----------------FYLILKLLNHKELTNLKGSLEKYQSANKEEAFSDQLLNLDNNRVTEDFELEADEDFNGNKVKDNKELKKFDTNKIYFDGENIIKHRAFYNIKKYGL---------NLLEKIADKAGYKISILKKYSNKKNEIEKNHKQENLHR--------KYARPRKDEKFTDEDYESYKQAIENIYTHLKNKVEFNELNLLQGLLL--RILHRLVGYTSIWERDLRF---- | |||||||||||||
5 | 5wbiA1 | 0.10 | 0.05 | 1.93 | 0.63 | HHpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGTSEIVLVPKRLKERMKTGCVALVLCLNITV------------------DPPDVIKIS---PCARIE-----A-WIDPFSKALETIGKNLSTQ--YERWQPRARYKVQLDPTVDEVRKLCLTCRKYA-KTERVLFHYNGHGVPKPTAN--------GEIWV-----------FNKSYTQYIPLPISELDSWLKTPSIYVFDCSAARMILNFAEGSSRDCILLAAVHELPQS-V--EFPADVFTSCLTTPIKMKWFCRRSLIIDESLIDTLLGELNWIFTAVTDTIAWNVLPHELFLFRQDLLVASLFRNFLLAERIMRSANC- | |||||||||||||
6 | 5a29A | 0.13 | 0.12 | 4.13 | 0.75 | MUSTER | MRVQAVKTYIDNV----QEGRSQIKPLLADGINTTTR-W---------IYPD-G-RTATIFANQQNFLRALTAMSVVTEDQRYQLEAVRITRYFMDN-----FIADNG-------LFYWGGHRFVNLDTLELEGPQNSVHELKNHYPYYPFLYHVDPHATERYIKAFWQAHVEDWQSLDMGRHGSYNYDDKVFHRPIPASLVDQSKLPIMPETKGLTFINAGSDLGSAAWGQYLMTQYKLAKHPKTGAPVYQFTSPKKREWPPQSDKDTNSKYGDGNIAREGNVLFKSNDKSIVFNNALIELADAAIREQVVDALLNFYRLPENGTIKPIFS-DGTSIEGIPLARDGY-------YGPKGRVFNAHKPKTEEYLLPI--LRAYRLQADPELW-------QLAANMTHHYG--WGSLGNDAKAKPTLNMQLSSVS------PMTLFSAIELYQITQ-QPEYLEFARAAADKLVEKRFV-YFLANPRYLNASI--DAIEPLALLTLDATLKKTAQVAPY | |||||||||||||
7 | 3nzsA | 0.10 | 0.08 | 2.90 | 0.97 | CNFpred | EIVAKTYQLLARR--------EVWDQSALDVGLTMQLLFSDENVRAIAVQKLESLEDDDVLYLLQLVQAVKFEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQRFAVILEAYLRGCMLHDFTQQVQVIEMLQKVTLDIKSL-SSQVISQLKQKLENLQNS-QLPESFRVPY---DPGLKAGALAIEKCKVM-ASKKKPLWLEIGIIFKHGD-DLRQDMLILQILRIMESIWET----------------------------------------------------SLDLCLL------PYGCISTGD------KIGMIEIVK-----DATTIAKIQQSTVGNTGAFKDEVLNHWLKEKSP----EKFQAAVERFVSCAGYCVATFVIGDRH--------NDNIMITET-------------GNLFHIDF-VLTPDFLFVMGTSGKTSPHFQKFQDICVKAYLALRH----------------HTNLLIILFSMMLMTGMPQLTSKE | |||||||||||||
8 | 2pffB | 0.11 | 0.09 | 3.08 | 0.93 | HHsearch-2 | ---------MDAYSTRPLTLHGSLEHVLLVPTASFFIASQLQEQFNKILPETEGFAA----------------------DDEPT------TPAELVGKFLGYVSSLVEPS----KVGQFDQVLNLCLTE--FENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKS--NSALF---RAVGEGNAQLV-----------AI-FGGQGNTDDYFEELRDLYQTYHVLEWLENPSNTKDYLLSIPISCPLTAKLELRSYLKGATGSQGLVTAVAIAETDSW--ESFFVSVRKAITVLFFIGVRCYEAYPNTSILEDSLENNEGVPSP------MLSIS-NLTQEQQDYVNSHLPAGKQVEISLVNGAKNLVVSGPPQSTLRKAKAPSGLDQIPLKFSNRFLPVASPFHSHLLV------------------------------------PASDLINKDLVKNNVSFNAKDFDGSDLRVLSGSIS----ERIV--DCIIRLPVKW | |||||||||||||
9 | 3nowA | 0.07 | 0.07 | 2.79 | 0.94 | Neff-PPAS | NCVSTAQFCLQTILNALSGLKNKPDSKP--DKELCTRNNREIDTLLTCLVYSITDRTISGAARDGVIELITRNVHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENYDEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELSKKDKAKALCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTL---DAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEAKFAKQHIPEEHELDDVDFINKRITVLANEGITLAKTESHNSQELIARVLNCGLKELRGKVVQEGGVKALLRMALEGT--------------EKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNESVRQRIIKEQGVSKIEYYLMED | |||||||||||||
10 | 3uo8B1 | 0.12 | 0.05 | 1.69 | 0.62 | HHsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLAKDKVALLIGNMNYR-EHPKLLVDVYELTNLLRQ-L-D-F------------------------------------------------KVVSLLDLTEYEMRNAVDEFLLLLDKGVYGLLYYAGHGYENFG-----NSF----MVPVDAP---------NPYRSENCLCVQNILKKETGLNVFLLDMCRKRNDYDDTALKTANIVFGYATCGAEAFIQHSGLANGIFMKFLKDRLLE--------DK---KI-------TVLLDEVAEDMGKLSLSEK--RALTDPI-Q------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |