Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| Seq | QNEIWSIKMEIKAKYSFPKISLPLSANKDGIAIPKFVTEFIHSVVENLPNLVKIDDSCSLLYVPETMEHVDVILKEVNLLHNFFCFVSERFVEPQSQHLADFFTHVLAVAGYASTFFWLYLPDLAPEEINVLLSDFLRMRIKPIQPCIREIYVNVLQSLKATIQSGWYPNIQREPAADTEASFVKIILHNLAELPANSNSSQRVALNDHLANLQEMLNLLRANIIHAPIQDLELLSVLRYIDTVIIDVGLLVYSLYKGEDEEKEDIALAEVNPAQVLDQLPGNIQHIISAVIYPTIRKAF |
1 | 3dyjA | 0.11 | 0.10 | 3.60 | 1.16 | FFAS-3D | | -SAVSGIIADLDTTIFATAGTLNREGAETFADHREGILKTAKVLVEDTKVLVQNAAGSQ----EKLAQAAQSSVATITRLADVVKLGAASLGAEDPETQVVLINAVKDVAKALGDLISATAAGKVGDDPAVWQLKNSAKVVTNVTSLLKTVKAVEDEATKGT---------------RALEATTEHIRQELAVFCSPEPPAKTSTPEDFIEDVIATANLSRRAIADLRACKDVRLRALHYGRECANGYLELLDHVLLTLQKPNPD-------LKQQLTGHSKRVAGSVTELIQAAEAK-- |
2 | 6j5tG | 0.09 | 0.07 | 2.58 | 1.15 | HHsearch-2 | | ---------------------------------------VVTVFLEKTLNILEEKG----RTVSDYRKQLEDLQSELKYMQSFLKDAERQKRTNETLR--TLVADLRELVYEAEDILVDCQLQY---KKSKRLQE-INERITKIKSQVEPYFE-FITPDRW----SSPVY-----DHTQVVGL-EGDKRKIKEWLFRSNDQLLMAKTTIAQEVFNDEQIMRSILRNLGDASDDIGSWWTRSESVAKRVQARDKTHRP--ELLSPD-N-SWLLFCN-V-AFAPELEDVGK-EIVTKCKGLP |
3 | 4m70A | 0.15 | 0.05 | 1.69 | 1.30 | HHsearch | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAMAYAAVTSLMRTIHQSMELT--------GCDLQPFYEKLKSLRAILE--------LTILEVEIVEVAYTTEDMVDSESR--NVFLAQNEAMWEIFFVLE-QALECIDSTVK-QWMATSDS-- |
4 | 5k7vA | 0.08 | 0.07 | 2.85 | 0.87 | SPARKS-K | | DILAESSKKSIEELARAAD------NKTTEKAVAEAIEEIARLATAAIQLIEALAKNLAS--EEFMARAISAIAELAKKAIEAIYRLADNH--TTDTFMARAIAAIANLAVTAILAIAALASNHTT-------EEFMARAISAIAELAKKAIEAIYRLAD------------NHTTDKFMAAAIEAIALLATLAILAASNHTTEFMAKAISAIAELAKKAIEAIYRLADNHTYIEKAIEAIEKIARKAIKAIEMLAKNITTE-----EYKEKAKSAIDEIREKAKEAIKRLEDNRT---- |
5 | 2x0cA | 0.11 | 0.10 | 3.48 | 1.12 | FFAS-3D | | ---------------------------------QKECDNALRQLETVRELLENPVQPINDMSYFGCLDSVMENSKVLGAMTGISQNAKNGNLPEFGDAIATASKALCGFTEAAAQAAYLVVEPTQFARANQAIQMACQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQKEVANSTANLVKTIKALDGDFTEENRAQCRAATAPLLEAVDNLSAFASNSPEGRAAMEPIVISAKTMLESAGGLIQTA------RALAVNPRDPPRWSVLAGHSRTVSDSIKKLITSMRDKA- |
6 | 4m70A | 0.15 | 0.05 | 1.69 | 0.54 | HHpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMAYAAVTSLMRTIHQSMELT--------GCDLQPFYEKLKSLRAILE--------LTILEVEIVEVAYTTEDMVDSESR--NVFLAQNEAMWEIFFVLE-QALECIDSTVK-QWMATSDS-- |
7 | 5k7vA | 0.10 | 0.09 | 3.25 | 0.82 | MUSTER | | ------IEEVVAEMIDILAESSKKSRAADNKTTEKAVAEAIEEIARLATAAIQLIEALAKNLASFMARAISAIAELAKKAIEAIYRLADNHTT--DTFMARAIAAIANLAVTAILAIAALASNHTT-------EEFMARAI----SAIAELAKKAIEAI-YRLADNHTTDKFMAAAIEAIALLATLAILAIALLASNHTT--EEFMAKAISAIAELAKKAIEAIYRLADNHTSPTYIEKAIEAIEKIARKAIKAIEMLAKNITTEE--YKEKAKSAIDEIREKAKEAIKRLEDNRT---- |
8 | 3gb8A | 0.08 | 0.07 | 2.87 | 0.97 | CNFpred | | ----------VHTFYEAVGYMIGAQ---DQTVQEHLIEKYMLLPNQVWDSIIQQATKNVDIL--KDPETVKQLGSILKTNVRACKAVGHPFVIQ-MVTKQPLIRSMRTVKRETLKLISGWVSRSVAENFVPPLLDAVLIDY-AREPEVLSTMAIIVNKLGGH-------------ITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIP--PTQFKLVLDSIIWAFKHADTGLQILFTLLQNVA--QEEAAAQSFYYFCDILQHIFSVVTDTSHTAGLTMH |
9 | 4m70A | 0.15 | 0.05 | 1.69 | 1.10 | HHsearch-2 | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAMAYAAVTSLMRTIHQSMELT--------GCDLQPFYEKLKSLRAILE--------LTILEVEIVEVAYTTEDMVDSESR--NVFLAQNEAMWEIFFVLE-QALECIDSTVK-QWMATSDS-- |
10 | 5dlqB3 | 0.09 | 0.08 | 3.13 | 0.78 | Neff-PPAS | | -PPLNFLSSPVQRTL-MKALVLGGFAHMDTETKQQYWTEVLQPLQQRFLRVINQENFQQMCQQEEVKQEITATLEALCGIAEAT--------QIDNVAILFNFLMDFLNNCIGLMEVYKNTPET-VNLIIEVFVEVAHKQICYLGSKAMHLYEACLTLLQVYSKNNLGRQRIDVTAEEEQYQDLLLIMELLTNLLSKVS-----AADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICEIFPEK-------------------IPQLP-EDLFKSLMYSLELGMTSMSSEVCQLCL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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