Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MLKSEIEQCLSKITSNIRLCAFVIKIGIVDHVMSRLCRFYGSDSIKYCASHYHDPRVIDSILIGLYGASYSDFSRMSYQVRSNIVYCVGKHGIAGVFKLHNSGFYSELLGMCYDFVHARGKGVKLQELCDFMKLSCSIQLGQMYHMMVKVKCSIGDEQSDIRKLVSQECSVGYLVYRSLLFGRYAYHVRKAFRHLYAPSDKNPVRTVSGLNIPHSLIRLNHRGIFTKIEHCINAEKMSFNVFVVDIVRHIDKLLL |
1 | 4xriA | 0.11 | 0.10 | 3.56 | 0.74 | SPARKS-K | | SLSTVILQRLEETLPLILEDMQTSLCTVLQATVQRLDKEIAPQGDRIMQVLLSVPEGVFAAISALANAMEEEFAKYMEAFAPFLYNALGNQE--------EPSLCSMAIGLVSDVTRSLGERPYCDNFMNYLLGNLKPAILQCFGDIASAIGGHFETYTIVAQVLQQAATITAMIDYVISLREGIMDAWGGIIGAMKTSN------------KTNVLQPYVESIFALLNSIANDPNRS-EALMRASMGVIGDLAD |
2 | 3gs3A | 0.07 | 0.05 | 2.32 | 1.10 | FFAS-3D | | --RAKVVDWCNELVIASP----STKCELL---------AKVQETVL-----GSCAELAEEFLESVLSLAHDSNMEVRKQVVAFVEQVCKV----------KVELLPHVINVVSMLL-----RDNSAQVIKRVIQACG----SIYKNGLQYLCSLMEPGDSAEQAWNILSLIKAQILDMIDIRTNAIKFLEGVVVLQSFADEDSLKRDGDFSFRREKLQEEGNNILDILLQFHGTTHIS-SVNLIACTSSLCTIA- |
3 | 3wozA1 | 0.16 | 0.05 | 1.69 | 0.31 | HHpred | | -------------------------------------TEDVAEVLNRCASNWSERK--EGLL-GLQNLLKRTLS--RIELKRLCEIFTR-FADPH------GKVFS-FLETLVDFIQVHKDDLQLTQLLK----------------------------------------------------------------------------------------------------------------------------- |
4 | 6n1zA | 0.10 | 0.09 | 3.36 | 0.69 | MUSTER | | ESTHVLQPFLPSILDGIHLAASEVLNLVMETLCIVCTVSKICPFTIAIFLKYSNDPVVASLAQDIFKELSQIEACQGPMQMRLIPTLVSIMQAPA--DKIPAGLCATAIDILTTVVRNTKPPLLICQAFPAVAQCTLHTNATMQNGGECLRAYV----SVTLEQVAQWHD-EQGHNGLWYVMQVVSQLLD------PRTSEFTAAFVGRL---STLISKAGDQILRAILSKMQQAET--LSVMQSLIMVFAHLVH |
5 | 4c0pA | 0.05 | 0.04 | 2.09 | 0.95 | CNFpred | | VFLDRLAVIFRHTNP-HPCQKVIQEIPVLSETLNKHIVERCCRCLRFAVRCVGSAALLQPLVTQMVNVYHHQHSCFLYLGSILVDEYGMEEG----CRQGLLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQ-----VVIPILQWAIAS-----TTLDHRDANCSVMRFLRDLIHTGVANDHEEDFELRK-ELIGQVMNQLGQQLVSQLLHTCCFC--LPPYTLPDVAEVLWEIMQ |
6 | 1vt4I3 | 0.11 | 0.06 | 2.24 | 0.61 | HHsearch-2 | | ---------------------------------------------------------------------EYA---L---HRSIVDHYNPKFDSDDLPPYLDQYFYSHIGHHLKNIEHPE---RMTLFRMVFLDFRFLEQ------K--IRHDSTGSILNTLQQLKFYKPYI---CDNDPKYERLVNAIL----DFL--P-KIEENLICSKYT-DL--------------LRIALMAEDEAIFE----EAHKQVQR |
7 | 3ea5B2 | 0.05 | 0.04 | 2.10 | 0.87 | Neff-PPAS | | -VADMLMGLFFRLLEKDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARSNIGADFIPYLNDIMALCVAAQNTKPETLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAED-PQLYSEDATSRAAVGLIGDIAAMFPDGS---------------IKQFYGQDWVIDYIKRTRSGQLFSQATKDTARWAREQQKR |
8 | 4kxfK6 | 0.19 | 0.04 | 1.27 | 0.69 | HHsearch | | -----------------------------------------------------------------------DMTEDSDLIEAVLV---P-------------DQ---VERLWAQIQ----ESRCLRNLPLFVVITCAIQMGRQE-----F-QA-----------------------H------------------------------------------------------------------------------ |
9 | 4xriA | 0.06 | 0.06 | 2.67 | 0.71 | SP3 | | PEEKVLEPIVKTG---MQPLIAMMEDESIQVRDSTA--YALGRITEACSEAIDPNTHLEPLIRSLFNGLMNSPKMAASCCWALMNIAERFAGEPGAAQNPLTPHFNQSVTNLLTVTAPMNGDSTVRTAAYEVLSVFVQNAANDSLSAVASLSTVILQRLEETLPLQQQVVSVEDKLILEDMQTSLCTVLQATVQRLDKEIAPQGDRI--MQVLLQILSTCGGKVFAAISALANAMEEEFAKYMEAFAPFLYNALG |
10 | 5cwmA | 0.08 | 0.06 | 2.52 | 0.87 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELLRQAKELEKALRTAEEA--AREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRV----------AEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLRIALERALRVAEEAARLAKRVLELAEKQGD-------PEVARRAVELVKRVAELL------------------ERIARESGSEEAKERAERVRE-------EARELQERVKELRR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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