Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DLSESCFASLKSALEVPRLYRRTNKEVPTTASSYVDSALRPCHQLRSGHQDKLKPELIQQWLEGALSESTHRFYETVSDVLHSVKKMEESLKRLKQARKSSPANPGGSGGGGGMSDDDKIRLQLALD |
1 | 5cwmA2 | 0.12 | 0.09 | 3.37 | 0.84 | SPARKS-K | | VALRAVELVVRVAELLLRIAKESSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESAKERAERVREEARELQERVKELRER----------------------- |
2 | 2a2fX2 | 0.11 | 0.11 | 3.94 | 0.96 | FFAS-3D | | -AEKQVGLRICS--KIDEFFELSAYDLPGIASAFITDMISYLKSTFDSFAF-KLPHIAQAACRRTFEHIAEKIYSIMYDSTGALTQINLDLMQCEFFAASEPVPGLKEGELSKYFLRNRQLLDLLIL |
3 | 2a2fX2 | 0.16 | 0.14 | 4.72 | 0.42 | HHpred | | QVGLRICSKIDEFFE-LSAYDWL----PGIASAFITDMISYLKSTFDS-FAFKLPHIAQAACRRTFEHIAEKIYSIMYDSTGALTQINLDLMQCEFFAASEPVP--GL-KEGELSKYLRNR-QL--- |
4 | 2yfaA2 | 0.12 | 0.12 | 4.16 | 0.95 | MUSTER | | GDIGQLNKDLTDLRIARLQYMIANGD--DTAAANTLAKLDAFSKQQAYLATTFK-SPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMAVANITTSRAEMTVQGADIVKSDALYQIQLER- |
5 | 2nrjA | 0.12 | 0.09 | 3.31 | 0.59 | CNFpred | | DLPGRIVQDQKNARAHAVTWDT-------KVKKQLLDTLNGIVEYDTT-----FDNYYETMVEAINTGDGETLKEGITDLRGEIQQNQKYAQQLIEEL-------------------TKLRDSIGHD |
6 | 2a2fX2 | 0.12 | 0.11 | 3.86 | 0.61 | HHsearch-2 | | QVGLRICSKIDEFFE-LSAYDWL----PGIASAFITDMISYLKSTFDS-FAFKLPHIAQAACRRTFEHIAEKIYSIMYQINLDLMQCEFFAASEP-----VPG----LKEGELSKYFLRNRLDLLIL |
7 | 2yfaA2 | 0.09 | 0.09 | 3.31 | 0.86 | Neff-PPAS | | GDIGQLNKDLTDLRIARLQYMIAN--GDDTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELG-DTISAYKLSLNKMRQGYDATRAARVSMAVANITTSRAEMTVQGADIVKRSDALYQIQLER |
8 | 2a2fX2 | 0.12 | 0.10 | 3.64 | 0.90 | HHsearch | | QVGLRICSKIDEFFE-LSAYDWL----PGIASAFITDMISYLKSTFDS-FAFKLPHIAQAACRRTFEHIAEKIYSIMTQINLDLMQCEFFAASEPV-----PG----LKEGELSKYFLRNRQDLLI- |
9 | 3njbA | 0.07 | 0.05 | 1.98 | 0.59 | SP3 | | DLDARTERLVERIAAMP-----------------VNQLIMAKLACNTALLNQGVATSQMVSTVFDGIARHTPEGHAFVATAREHG-FREAVRRRDEPMGDHGRRASDV------------------- |
10 | 2yfaA2 | 0.09 | 0.09 | 3.31 | 0.64 | PROSPECTOR2 | | GDIGQLNKDLTDLRIARLQYMIAN--GDDTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTI-SAYKLSLNKMRQGYDATRAARVSMAVANITTSRAEMTVQGADIVKRSDALYQIQLER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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