>PF12014 (145 residues) VYTYATLDPKVYTPTEDKPYRGIWVGDYSGHGCEFLLVHQPDDEEPFDEASVVRGEDETA EEWESRKKEERIYRGSLEAIKLTGDPNVPRGEYTFIADDISKGGFIRTATEQRFKGARIV RSTGHIANPMFRNHTYIESQLIMIS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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Seq | VYTYATLDPKVYTPTEDKPYRGIWVGDYSGHGCEFLLVHQPDDEEPFDEASVVRGEDETAEEWESRKKEERIYRGSLEAIKLTGDPNVPRGEYTFIADDISKGGFIRTATEQRFKGARIVRSTGHIANPMFRNHTYIESQLIMIS | |||||||||||||||||||
1 | 5vztB2 | 0.28 | 0.20 | 6.10 | 1.59 | SPARKS-K | -----------YLPPSRLIKPGLFKGTYGSHGLEIVMLSFHGR--------------------------------RARGTKITGDPNIPAGQQTVEIDLLPDLENQRNFNEQPFVGVMCFYGTGLIAGHGFTSPERTPGVFILFD | |||||||||||||
2 | 5vztB2 | 0.25 | 0.18 | 5.54 | 1.59 | FFAS-3D | -----------YLPPPDDLIKGLFKGTYGSHGLEIVMLSFHGR--------------------------------RARGTKITGDPNIPAGQQTVEIDLVLPVGVSSRNEDYPRTCRMCFYGTGLIAGHGFTSPERTPGVFILFD | |||||||||||||
3 | 5vztB | 0.28 | 0.21 | 6.32 | 2.84 | HHpred | CLTYRR----IYLP-PSRPDPGLFKGTYGSHGLEIVMLSFHG--------------------------------RRARGTKITGDPNIPAGQQTVEID-LRHRLLSRIVLGQPFVLCMCFYGTGLIAGHGFTSPERTPGVFILFD | |||||||||||||
4 | 5vztB | 0.26 | 0.19 | 5.97 | 1.08 | MUSTER | CLTYR----RIYLPRPDDLIKGLFKGTYGSHGLEIVMLSFHGR--------------------------------RARGTKITGDPNIPAGQQTVEIDLVLPVGVSSRNEDYPRTCRMCFYGTGLIAGHGFTSPERTPGVFILFD | |||||||||||||
5 | 5vztB | 0.26 | 0.19 | 5.75 | 1.39 | CNFpred | CLTYRRI----YLPPSRLIKPGLFKGTYGSHGLEIVMLSFH--------------------------------GRRARGTKITGDPNIPAGQQTVEIDLRH---RIQLPDLENQR-RMCFYGTGLIAGHGFTSPERTPGVFILFD | |||||||||||||
6 | 5vztB | 0.29 | 0.21 | 6.52 | 4.12 | HHsearch-2 | CLTYRRI----YLP-PSRPDPGLFKGTYGSHGLEIVMLSFHG--------------------------------RRARGTKITGDPNIPAGQQTVEIDLRHRDLLSRIVLGQPFVTCRCFYGTGLIAGHGFTSPERTPGVFILFD | |||||||||||||
7 | 5vztB2 | 0.25 | 0.17 | 5.36 | 1.56 | Neff-PPAS | -----------YLPPSRLIKPGLFKGTYGSHGLEIVMLSFHG--------------------------------RRARGTKITGDPNIPAGQQTVEIDLRHRIQLPDLENQRNFNCRMCFYGTGLIAGHGFTSPERTPGVFILFD | |||||||||||||
8 | 5vztB2 | 0.26 | 0.18 | 5.54 | 5.02 | HHsearch | -----YLP-----PSRPLIKPGLFKGTYGSHGLEIVMLSFHG--------------------------------RRARGTKITGDPNIPAGQQTVEID-LRHRIQLPDVLGQPFPRCMCFYGTGLIAGHGFTSPERTPGVFILF- | |||||||||||||
9 | 5vztB2 | 0.26 | 0.19 | 5.75 | 0.91 | PROSPECTOR2 | -----YLPP---SRPDDLIKPGLFKGTYGSHGLEIVMLSFHGR--------------------------------RARGTKITGDPNIPAGQQTVEIDLVLPVGVSSRNEDYPRTCRMCFYGTGLIAGHGFTSPERTPGVFILFS | |||||||||||||
10 | 5vztB | 0.28 | 0.21 | 6.32 | 1.30 | SAM | -LTYR----RIYLP-PSRPDPGLFKGTYGSHGLEIVMLSFHGR--------------------------------RARGTKITGDPNIPAGQQTVEIDLRHRDLLSRIVLGQPFVLP-CFYGTGLIAGHGFTSPERTPGVFILFD | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |