Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | KNQVVFATKNERPEWVIPGVQKVVYTPSREPRAETHHYVRTLESAVLQGQAVYRVAEQLRSMGFVPDIIYGHSGWGPTLFMKEVFPDAPLMCYFEWFYHARGADADFDPSDPLTADDLCRIRVKNSPILQDLYTCDWGVSPTQWQRSQFPPEFQSKISVLHDGVDTNY |
1 | 6d9tA1 | 0.11 | 0.10 | 3.41 | 1.16 | SPARKS-K | | GHEVHFITSNIPFRIRKPNMIFHQVEVNQYAVFQYPPY----------DITLSTKIAEVIKEYD-LDLLHMHYAVPHAICGILARKDIKIMTTLH----------------GTDITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEIIEKEIIPIYNGSELIT |
2 | 2gekA2 | 0.12 | 0.10 | 3.34 | 1.19 | FFAS-3D | | GHEVSVLAPA-SPHVKLPDYVVSGGKAVFG---------------PATHRKVKKWIAEG-----DFDVLHIHEPNAPSLSMLALQAEGPIVATFH-----------------TSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEALGSDAVEIPNGVYDW- |
3 | 3c4qA | 0.18 | 0.15 | 4.86 | 0.66 | HHpred | | GIEVDIYTRATRPSQGAENLRVINIAAGPLSKEELPTQLAAFTGGMLS---------FTRREKVTYDLIHSHY-WLSGWLLRDLW-RIPLIHT----AHTLAAV-----D---TPESEA----RRICEQQLVDNADVLAVNTQEEMQDLMHHYDDRISVVSPGADVEL |
4 | 3c4qA | 0.14 | 0.12 | 4.08 | 1.15 | MUSTER | | GIEVDIYTRATRPSQGEENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREK------VTYDLIHSHYWLSVGWLLRDLW-RIPLIHTAHTLAAVDT----------------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYPDRISVVSPGADVEL |
5 | 4qlbA | 0.09 | 0.09 | 3.38 | 1.31 | CNFpred | | GFRCMYGRWLI-----EGYPKVILFDLGSGKMNEWKH-DIESNDAVILGFMVALFLKHFRESVTPLVVAHFHEWQAGVGLLMTRLLDIATVYTTHATLLGRHLGADLYNNLSFDLDAEAGKYHQYCLERAACQTAHIFTTVSEITGLEAEHFLCRPDVLTPNGLNVVK |
6 | 2gekA2 | 0.10 | 0.08 | 2.86 | 0.91 | HHsearch-2 | | GHEVSVLAPASPHVK--LPDYVVSGGKAV-----FGP-------------ATHRKVKKWIAE-GDFDVLHIHEPNALSMLALQA-AEGPIVATFHTSTTKS--------------LT---LSVFQGILRPYHEKIIGRIAVSDLARRWQMEALGSDAVEIPNGVYDWS |
7 | 6d9tA1 | 0.11 | 0.09 | 3.24 | 1.22 | Neff-PPAS | | -HEVHFITSNIPFRIRKPNMIFHQVEVNQYAVFQYP----------PYDITLSTKIAEVIKE-YDLDLLHMHYAVPHAICGILARKDIKIMTTLHG----------------TDITVLGYDHSLQGAIKFGIEKSDIVTSVSKSLAQETHEIIEKEIIPIYNGSELIT |
8 | 2gekA2 | 0.10 | 0.08 | 2.85 | 1.39 | HHsearch | | GHEVSVLAPASPHV--KLPDYVVSGGKAV-----FGP-------------ATHRKVKKWIAE-GDFDVLHIHEPNALSMLALQA-AEGPIVATFHTSTTKSL-------------T----LSVFQGILRPYHEKIIGRIAVSDLARRWQMEALGSDAVEIPNGVYDW- |
9 | 3c48A1 | 0.13 | 0.11 | 3.95 | 1.31 | PROSPECTOR2 | | GIEVDIYTRATRPSQGEENLRVINIAAGPYEGLS------KEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLRDLWRIPLIHTAHTLAAVKNSYDT------------PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYPDRISVVSPGWAATA |
10 | 4hlnA1 | 0.10 | 0.10 | 3.50 | 1.24 | SAM | | GHRVMVVMPRYLNG--KDNVDWVFVDHPSYHRP-----FGAFGDNQFRYTLLCYAACEAPLI-LQSCMFVVNDWHAVPVLLAAKYRDSRSTLVIHNLAHQGVEPASTYPDL--GLPPEWYGAEAVNFLKGAVVTADRIVTVSQGYSWEVTEGG-SVLNGIVNGIDH-T |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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