Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | PEQYARLKAEITAPYRGLRQFIYIACGASGFIGALIFFSQLLAGRDVEKTLPSLAVQIGVVALMVFLWRWEQ |
1 | 5u71A1 | 0.11 | 0.11 | 4.00 | 0.81 | SPARKS-K | | EAMEKMIENLRQTELKLTRKAAYVRYFNSSAFFFSGFFVVFLSVLPYALILRKIFTTISFCIVLRMAVTRQF |
2 | 6eznB | 0.10 | 0.10 | 3.61 | 0.66 | FFAS-3D | | -TSKRAYFAQIEKYPKLKLIDTFCFFLVLLGVIQCTFIILIRDNFPFNAFLAGFIICVGQFVLLMSLRLQLC |
3 | 5oqtA | 0.09 | 0.08 | 3.18 | 0.30 | HHpred | | -DAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIPNPVAFALNYIHQDWVAGFISLGAI---- |
4 | 1p49A1 | 0.12 | 0.10 | 3.43 | 0.97 | MUSTER | | -------------FTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLH- |
5 | 5mpmA | 0.17 | 0.17 | 5.50 | 0.67 | CNFpred | | FSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGFPEALIPVQLLWVNLVTDGLPATALGFNP |
6 | 6a69A | 0.11 | 0.11 | 4.00 | 0.42 | HHsearch-2 | | FTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATEP |
7 | 3ltjA2 | 0.14 | 0.14 | 4.75 | 0.83 | Neff-PPAS | | ERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDGWVRQSAADALGEIGGERVRAAMEKLAE |
8 | 5oqtA | 0.08 | 0.08 | 3.24 | 0.50 | HHsearch | | FDAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIPNPVAFALNYIHQDWVAGFISLGITSRD- |
9 | 3m1tA1 | 0.06 | 0.06 | 2.50 | 0.88 | SP3 | | PKAIAELLDVVNNEDSTVKAVSEKLSHDPVLSARVLRLANSAEVGTIDDAVVRLGQTLRTLVIASAVVGAVP |
10 | 2kubA | 0.06 | 0.06 | 2.50 | 0.47 | PROSPECTOR2 | | ENLDKMIAARKLITLDAEQQLELMKSLVATQSQLEATKNLIGDPNATVADLQIAYTTLGNNTQALGNELIKL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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