Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SSVYPVKHDHYGLPDAPRFPYRLDSGLMEMPISTVRYMGRNLPAGGGGYFRLLPYGASRWLIRQVNERDGRPAMFYFHPWEIDPEQPRVQGTTAKTRFRHYINLSRTEARLRRLMDDFSWGRMDQVF |
1 | 5z34A | 0.18 | 0.16 | 5.15 | 1.00 | MUSTER | | PGLWPLHHESIQDCIIPPCPTASIPGPWVLPMISWRDLNNFPCSMVDGCFEEGWFKFILTNFERHYLGNRAPFGFFVHEWFISSNPAIKR---AFVRFMDII-NNL---------NDVFMVNSAEVI |
2 | 5z34A | 0.16 | 0.13 | 4.44 | 1.49 | HHsearch-2 | | CTWPTTA---L--TNPGLWPYTLHPGPWVLPMISWRDL-NNFPCSVDGCFFTDEFKFILTNFERYLG-NRAPFGFFVHEWFISSNPA---------------IKRAFVRFMDIINNDVFMVNSAEVI |
3 | 5z34A | 0.16 | 0.13 | 4.43 | 1.30 | HHsearch | | CTWPTTA---L--TNPGLWPYTLHPGPWVLPMISWRDL-NNFPCSVDGCFFTDEFKFILTNFERYLG-NRAPFGFFVHEWFISSNPA---------------IKRAFVRFMDIINNDVFMVNSAEV- |
4 | 5z34A | 0.19 | 0.17 | 5.35 | 1.14 | SP3 | | --PYTLHHESIQDCIIPPCPTASIPGPWVLPMISWRDLNNFPCSMVDGCFFTPDFKFILTNFERHYLGNRAPFGFFVHEWFISSNPAIKR---AFVRFMDIINNL----------NDVFMVNSAEVI |
5 | 5z34A | 0.12 | 0.10 | 3.61 | 0.80 | SPARKS-K | | CTWPTTALTHHESIQDCIIPPCPTASPWVLPMISWRDNNFPCSMVDGCFFTPGWFKFILTNFERHYLGNRAPFGFFVHE-------------------WFISSNPAIKRAFVRFMDIINMVNSAEVI |
6 | 3hftA | 0.14 | 0.10 | 3.47 | 0.51 | FFAS-3D | | CNILVP-----WDAGIVLQPWRHWTGDVRVPYLWE------------------DDVACLYDWFDYWYQPDGINVLDFHPIHVY----NTESLRRYEDSREVHRLIRSRTFLQSLLAR---------- |
7 | 2wvvB | 0.17 | 0.12 | 3.87 | 0.27 | HHpred | | ------------------------EGFCLWPSKYTK---YTVA-NT-PY----KRDILGELVKAYND-EGIDVHFYFSVMDWSNPDYRYDIKSDSIAFSRF--LEFTDNQLKELATRYPTVK----- |
8 | 3hftA | 0.10 | 0.08 | 2.92 | 0.84 | MUSTER | | CNILVPWDA-----GIVLQPWRHWTGDVRVPYL----------WEDDVACLYDWE--FDSTFDYWY-QPDGINVLDFHPIHVY-NTESLR---RYEDSREVHNPVDLIRWSRTFLQSL----LARNI |
9 | 3rxzA | 0.17 | 0.12 | 3.87 | 0.64 | CNFpred | | -------------------PYELAVSLVELPVSWA-----LDDWQQYCFVPD-PAKAIELWRAELNAMIGGAWVLTNHPFLSGRPG----------------RAAALREFIAEVCAMVWVAGMSQIA |
10 | 3hftA | 0.10 | 0.08 | 2.89 | 1.30 | HHsearch-2 | | CNILVPWD--A---GIVLQPWRHWTGDVRVPYLWE----------DDVACLYDWEF--DSTFDYWYQ-PDGINVLDFHPIHVY-NTESLR---RYEDSREVHTSAGSRTFLQSLLARNI-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|