>PF11957 (475 residues) ESYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVTVWKEELFFTAC KNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLENQTEFGLE KAEEDDLEQITKDDDKSESKIPIDYNLYRKFWALQDFFRNPNQCYNKMHWKVFSAHASNV LSAFASFKLEEQRSYPSTCIKMDTSMEDSHKETHYFAKYLTNQKLLELQLSDSNFRRYVL LQFLILFQYLNSTVKFKAFLASGYETSETHELKPDQVEWVKTITEQVYTLLTETPPDGPT FAETVKNILKREEHWNTWKNEGCPPFKRPASDVSDEEPRKPRRPKRRIGDVIRDAQTVGK YHMGNPELTKLWNLCPNNLEACKSKDRDFLPSLETYFEDAIMELDPAAMVDDKYKKVNDG NFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDTKLETE |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | ESYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVTVWKEELFFTACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLENQTEFGLEKAEEDDLEQITKDDDKSESKIPIDYNLYRKFWALQDFFRNPNQCYNKMHWKVFSAHASNVLSAFASFKLEEQRSYPSTCIKMDTSMEDSHKETHYFAKYLTNQKLLELQLSDSNFRRYVLLQFLILFQYLNSTVKFKAFLASGYETSETHELKPDQVEWVKTITEQVYTLLTETPPDGPTFAETVKNILKREEHWNTWKNEGCPPFKRPASDVSDEEPRKPRRPKRRIGDVIRDAQTVGKYHMGNPELTKLWNLCPNNLEACKSKDRDFLPSLETYFEDAIMELDPAAMVDDKYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDTKLETE | |||||||||||||||||||
1 | 5xjcV | 0.11 | 0.08 | 2.75 | 1.24 | FFAS-3D | -TASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQV-----SPRGINAIFERLRNILHESEIDK---RVQYMIEVMFAVRK----------DGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLN--------------VFKMDPNFMENEEKYKAIKKEILTEINL------------------------------------------VSFRRTIYLAIQSSLDFEECAHKLLKM-----------EFPESQTK---ELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEG-------------------------IFKEQYDTIHRLETNKL--RNVAKMFALYTDSWSVLECSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPRNTRFA----INFFTSIG-----LGGLTDELREHL---------------- | |||||||||||||
2 | 4fgvA | 0.09 | 0.07 | 2.57 | 1.15 | CNFpred | QIMTEKLARQVDGSEWNCNVLCWAIGSISMAMNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNIMYIVGQYPRFAHWKFLKTVVNKLFEFMHESH--------------------------------------------EGVQDMACDTFIKIAKQCRRHFVALNEPFIEEIIRNIGKITCDLTPQQ------------------------VHTFYEACGYMVSAQGNRNQQERLLAELMIPNAAWDEIIKAATMN-------PGILHEPDTIKIIGNIMKTNVSACSSI---GPYFFPQIGRLYNDMLQMYAATSQLISEAV------------GEIATKMPKVRGLRTIK------EILKLVETFVEKA-EDLQAVRS------QMIPGLLDSVLVDYNRNVP--------ARDAEVLKAMTVIITRLQGLMED------QVPAIMENVFECTLDMINKFAEYPEHRVE | |||||||||||||
3 | 2pffB | 0.13 | 0.11 | 3.73 | 1.16 | HHsearch-2 | TRPLTLSHGSLEHVLLVPTASFFIASQLQEPTTAELVGKFLGYVSSLVEP------SKVGQFQVLNLCLALAAKLLQENDTVKTKELIKNYTAKRPFDKKS-----------NSALFRAVGEGNAQLVAI-----FGGQGNTDDY-----FEELRDLYQTYHVLV--GDLIKF---SAET---LSELIRTTLDAEKQGLNILEWENPSNTPD----KDYLLS------------IPISCPLIGVIQLAHYVVTAKLRSYLKGATSAETDSWESFSVRKVLFFIGVRCYEAYPNTSLP--------PSILE--DSLENNEGVPSPMLSISNLTQEQVQ-DYVNK----TNSHLPAG-KQVEISLGPPQLNLLRKAKPSGLDQSRIPERRFLPVASPF--------HSHLLVPA-SDLINKDLVKNNVSFNAKDIQIPVYDTFDGSSGSISRIVDCIIR----LPVKWETTTQFKAT | |||||||||||||
4 | 5lj3T | 0.08 | 0.08 | 3.13 | 1.37 | Neff-PPAS | DEDVAFEYEIQKTPQ-NILTWKRYIEYWKDKQIRWLYERFCSQFVTDTSIWEDYIRWESETSRIFWLFQRCLKSCVRDCDRICLSYLELAIEMIRHALASSLMKM----------EMHRKVWDPVIKFVEEKVESTDEAELINVLLVKGFTIWSSHILERYQQKRNESLATLALTRNITIKSVYEKYLLNFNYLASLEKLGDNQYEEFMRQMNGPDKWLFLILSLAKYYIGRLDSCGDLLKKSLQQFDRIYNFYLLFEQECSQFILGKLK-ENDDWTEKLQAHMATFESLINLYDIYLNDVALRQDSLVETWMKRVSLQKSACNVYSEAILKIDPRKVGTPGSFGRLWCSYGDLYWRSYPYIEDLEEIYLNWADRELDHVPTNPEILLSLRIWSKYIDYLEAYIFNKTKMAYNTVIDLRPAMAENFALFLQNYEVMESFQVPLFPPEIQYELWIEYLEVATSHPEHKNLCSNGID | |||||||||||||
5 | 5mqfM | 0.06 | 0.06 | 2.65 | 1.04 | PROSPECTOR2 | FSVKCWLRYIEFKQGAPKPRLNQLYERALKLLP-CSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERTFDRALRALPITQHSRIWPLYLRFLRYRRFLKLSSSDRLDVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDDARVILEKATKVNFKQVDDLASVWCQRKATALPARRAEYFDGSEPVQNRVDLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLQYDMFNIYIKRAAEIRGIYQKAVLSDEHAREMCLRFADSFCSQICDPRTTGAFTQV | |||||||||||||
6 | 4l3iA | 0.10 | 0.08 | 3.01 | 1.24 | FFAS-3D | ----------------------ESIVCLQKA--LNHLREIWELIDQRLQRTEV----------VKKHIKELLDAEEESLKERLIKSISVCQKELNTLCSELHV------------------------------EPFQEEGETTILQLEKDLRTQVE---------LRKQKKERKQELKLLQEQDQELCEILCPHYDIDSASV-----------------PSLEELNQFRQHVTTLRETKASRREEFVSIKRQIILTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEQK--------SQNEAVCEGLRTQIREL--WDRLQIPEEEREAVATISGSKAKVRKALQLEVDRLEELKQNKKVIEARVELVQYWDQCFYSQEQRQAFAPFCAEDYESLLQLHDAEIVRLKNYYEVHKELFEGVQKWEETLFLEFENLLKEEKQRAKLQKLPKLEEELKARIELQWEHRLEKERAKQE | |||||||||||||
7 | 5uwtC | 0.10 | 0.08 | 2.82 | 1.13 | CNFpred | TNILELLSTKFMTSPDTRAITLKCLTEVSNLK-DLIKRQTVLFFQNTLQQIATSVM-QSFLQDLAMFLTTYLARNRALLLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYEP-----------------LKKHIYEEICSQLRLVIENMVRPEE---ESDTIQLYKSEREVLVYLTHLNVIDTEE--------------------------IMISKLARQIDGSEWSWHNINTLSWAIGSISGTM-----------------SEDTEKRFVVTVIKDLLGLCEQKRGNKAVVASDIMYVVGQYPRFLKAHWNFLRT---------------------VILALFEFMH-EGVQDMACDTFIKIVQKCKYHFVIQQ---RESEPFIQTIIRDIQKTTA--------DLQPQQVHTFYKACGIIISE---------RSVAERNRLLSDLMQLPNMAWDTIVEQSTANPT | |||||||||||||
8 | 1vt4I | 0.12 | 0.11 | 3.95 | 1.06 | HHsearch-2 | DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKAVSGTLRLFWTLLSKQEEMVQKFVEEPIRSMMTRMYIEQRDRLYNDNVSRLQPYL----KLRQALELRPAKNVLIDGVLGGKTWVALDVCLSYKQCKMDFKIFWLNLKNCNSPMLQKLLYQIDPNWTSRSDHS--SNIKLRIHSIQAELRRLLKSKYENCLLQNAKLSCFKQSTTTHISLDHH-SMTLTPDEVKSLLLKPQDLPREVLTTLSIAESIRDGLATWDNWKHVN---------CDKLTTIIESSLRKMFDRLSVFPPSAPTILLSWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPLKVKENEYSIVDHIPKTSDDLIPPYLQYFYSHLKNIE-HPE----RMTLFRMVFLDFRFLEQKIRHDSSGSILKPYICDND-PKYERLVNAILD-FLPKIEENLI-CSKYTDLLRIALMA------EDEAFEEAHKQ | |||||||||||||
9 | 5mqfM | 0.06 | 0.06 | 2.68 | 1.25 | Neff-PPAS | PLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSN---YQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRS--------GHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVWHKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEKATKVNFKQVDDLASVWCQCGELELRH-ENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAISLFKWPNVSDIWSTYLTKFIARYGGRLDGCPPKYAKTLYLLYAQLEEEWMAVYERATRAVPAQQYDMFNIYIKRAAEIYGVTHTRGIYQK | |||||||||||||
10 | 2ooeA | 0.07 | 0.07 | 2.66 | 1.04 | PROSPECTOR2 | MKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIM---SYQIWVDYIN---FLKGVEAV-------------GSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLA---KKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQPQEAQQVDMWK--KYIQWEKSNPLRTEDQTLITKRVMFAYIWYEAAQYLEQSSKLLAEKGD-------MNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLASHLNEDNNTRVLFERVLTSGSLP---------PEKSGEIWARFLAFESNI--------GDLASILKVEKRRFTAFREEYEGKEKALGYKDV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |