Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | KCEACKILATELQARLSETGKSHDVIELGYSVDDVKPKKRTEYRRSELRLLESMENVCDRILEYNIHKERKDSTRFAKGMSQTFQTLHGLVNKGVKVDLGIPYELWDKPSAEITQMKTQCETMVENFEDVIEKWYFNKQEEIPLIKYLCEDRVLRANDHQ |
1 | 4uosA | 0.08 | 0.08 | 3.18 | 0.72 | SPARKS-K | | VKKMLEKMIEEIKKMLEKAIKKKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKILKKAKEMAEKILKMVIELAEKILKKAEMAEKILKKVKELGVG-- |
2 | 1l9lA | 0.12 | 0.05 | 1.78 | 0.82 | FFAS-3D | | -YRTCLTIVQKLKKMVDKP--------------------------TQRSVSNAATRVCRT---------------------------------------------------GRSRWRDVCRNFMRRYQSRVIQGLVAGET----AQQICED--------- |
3 | 5w78A | 0.19 | 0.09 | 3.02 | 0.51 | HHpred | | TCVGCVLVVSVIEQLAQVHN-S-----------------------T---VQASMERLCSYLPE----------------------------------------K---------LFLKTTCYLVIDKFGSDIIKLLSADM---N-ADVVCHTL-EFCKQNT |
4 | 4uosA | 0.10 | 0.10 | 3.67 | 0.72 | MUSTER | | K-KMLEKMIEEIKKMLEKAIKKKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEK-KKAKEMAEKILKKVKELGVG-- |
5 | 5cwoA | 0.09 | 0.07 | 2.62 | 0.60 | CNFpred | | VARAAKVAAEVIKVAIQAEKE-----------------GNRDLFRAALELVRAVIEAIEEAVKQG-------NPELVEWVARAAKVAAEVIKVAIQAEK------------GNRDLFRAALELVRAVIEAIEEAVKQG--NPELVERVARLAKKAAELIK |
6 | 5w7dA1 | 0.22 | 0.11 | 3.36 | 0.84 | HHsearch-2 | | SCLGCVVLVSVIEQLAEV-HNS-----------------------S---VQVAMERLCSYLPE---------K----------------------------------------LFLKTACYFLVQTFGSDIIKLLDEAM---K-ADVVCYAL-EFCKRGA |
7 | 4uosA | 0.10 | 0.09 | 3.48 | 0.79 | Neff-PPAS | | -KEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIEAEKILKKAKEMAEKILKKVKELG-----VDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKKEMAEKILKKVKELGVG-- |
8 | 1sn6A | 0.15 | 0.07 | 2.51 | 1.17 | HHsearch | | YCEVCEFLVKEVTKLIDN---N----------------------KTEKEILDAFDKMCSKLP---------------------------------------------------KSLSEECQEVVDTYGSSILSILLEEV---S-PELVCSML-HLCSGL- |
9 | 4uosA | 0.10 | 0.09 | 3.51 | 0.61 | SP3 | | K-KMLEKAIKKVKEMLEKMIKEKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKLKKAKEMAEKILKKVKELGVG-- |
10 | 1eq1a | 0.10 | 0.09 | 3.24 | 0.64 | PROSPECTOR2 | | DAKHAKEFQKTFSEQFNSLVNS-----------KNTQDFNKALKDGSDSVLQQLSAFSSSLQGAISDANGKAKEALEQARQNVEKTAEELRKAH--------PDVEKEANAFKDKLQAAVQTTVQESQKLAKEVASNMEETNKLAPKIVQKKLHEAATKQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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