Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ADMKLMMVALGEGTQNYTCGANLTAPPSAIGAVATLFDASCDLVNSPPISTQQLGSIEEDAKSIGAHFFVDNTTPDFDILGLGNTRAKKTEECAAPNPTGDVKWLRLTAQADGSTSAVKEIYRLNTVGGLAPKSCEGKAVGDIVTVEYQAQYWIY |
1 | 5n8pA5 | 0.12 | 0.11 | 3.85 | 0.75 | SPARKS-K | | SGAAQTVTAGAGQNLTATTAAQAANNVAVDGGANVTVASTGVTSGTTTVGANSAASGT---VSVSVANSSTTTTGAIAVTGGTAVTVAQTAGNA---VNTTLTQADVTVTGNSSTTAVTVTQ---------TAAATAGATVAGRVNGAVTIT--- |
2 | 3ho4B3 | 0.08 | 0.07 | 2.81 | 0.60 | FFAS-3D | | --NCFCIQEVVSGLRGALHSGDGSQRLFILGYVKILTPEGEIFKEPYLDIHKLVFVYRQSERLYGSYVFGDRNGNFLTLQTKQWQEKPLCLGTSGEDELGE---VYILSSSKSTQTHNGKLYKIVDPKRPLPEECRATVQPAQ------------ |
3 | 3ho4B3 | 0.08 | 0.06 | 2.59 | 0.23 | HHpred | | --NCFCIQEVVSGLRQPVGALSGQRLFILEGYV-KILTPEGEIFFVYRGCQ--SERLY------GSYVFGDRNGNFLTLSPTKQWQEKPLCTSGSCRGYFSGHIVYILSSSKSTQTHNGKLYKIVDPKRPLPEECRATV-QPA------------ |
4 | 5n8pA | 0.12 | 0.12 | 4.12 | 0.85 | MUSTER | | SGAAQTVTAGAGQNLTATTAAQAANNVAVDGGANVTVASTGVTSGTTTVGA---NSAASGTVSVSVANSSTTTTGAIAVTGGTAVTVAQTAGNAVNTGNSSTTAVTVTAATAGATVAGRVNGAVTITDSAAASATTAGKIATVTLGSFGAATIDS |
5 | 3hfqA | 0.12 | 0.11 | 3.84 | 0.89 | CNFpred | | PDGQYAFLAGESQIASLKYDTQ----TGAFTQLGIVKTIPADYTAHNGAAAIRL-----DGHFLYVSNRGYNTLAVFAVTAHLTLIQQISTEGDFPRDFDLEAFVVVVNQN----TDNATLYARDL------TSGKLSLLQKDVTVPEGVCVRFL |
6 | 6f2pA | 0.12 | 0.12 | 4.30 | 0.70 | HHsearch-2 | | PGSDIGYYFPGGAAVKGLREA-RSGSWSSLRNFMTLWFDHGMYVLLPNKTSSATPQLETQLNVTGINFWNDEPTGLVTSNRKASVMTKETISVSDPTQSN-VGTIYIDVNKSNNSGGKSYKVKFSLTGTPGSNPIPIPYGGKKLGFNNSGIYQLS |
7 | 3s6pA2 | 0.09 | 0.08 | 2.99 | 0.98 | Neff-PPAS | | -----VSEAYALHTLTFARPSSA--------AALAFVWAGLPQGGTAPAGTPAWEQASSGGYLTWRHNGTTFPAGSVSYVLPEGFALERYDPNDGSWTDFASAGDTVTFRQVAV--DEVVVTNNPAGGGSAPTTVRVPPSNAYTNTVFRNTLLET |
8 | 3ecpA3 | 0.12 | 0.08 | 2.72 | 0.33 | HHsearch | | CD---------READIHDKLA-HNERFVVRSKHPKDVESGL----YLYDHLKNQPELPVDKRGKKNRPARSSRSGRITLKQGNTLNAVLAEEINPPKGETPLKWLLLTSEP-------------------------------------------- |
9 | 1ucuA3 | 0.15 | 0.08 | 2.83 | 0.76 | SP3 | | --------------------------------------DTTIALDNSTFKASATGLGGTDQKIDGDLKFDDTTGKKVTVTGGTGKDGYYEVSVDKTNG-------EVTLAGGATSP--------------LTGGLPATATEDVKNVQ-------- |
10 | 4aq1A5 | 0.06 | 0.05 | 2.19 | 0.62 | PROSPECTOR2 | | V---LQDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVSAVDQYGKEIK--------------------FGTKGKVTVTTNTEGLVIKNVNSDNTIDFDSGNSATDQFVVVATKDKIVNGKVEVKYFKNASDT--------TPTSTKTITVNVVNV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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