Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | FAFKFAPTLLSVLYGVLWQFVGIEVKRLEAFYQLSKEGGALAAESINVDYITSLNWWRPFQAIKLRHWAVAVSSVATTLAVSLVPTFG |
1 | 2vpyC2 | 0.12 | 0.12 | 4.38 | 1.16 | SPARKS-K | | PLWNFPLTALVLALGLAALPLRVLAGASLLLALLPLTLPPEARGHLLAGFWYGLFLLLGLGTFWQERLAPWAGLLAAAGLRALLVLAG |
2 | 4qncA | 0.10 | 0.09 | 3.33 | 1.03 | MUSTER | | -MENLIGYVAAFLTTVSFLPQVLRVVMT-------QTRDISRNMYIM---FFLGVVLWFVYGILRSDLPIILANVVTLFFVTIILYYK |
3 | 5oqtA | 0.12 | 0.11 | 3.98 | 0.81 | SPARKS-K | | GPALVLSFILSGLACVFAALCYAEFASTVP--------VSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLLSG |
4 | 4xu4A | 0.09 | 0.08 | 3.03 | 0.62 | FFAS-3D | | -----FPILVGAATASLRQALGGVAAVVGTYVTTALVHAFPVVPVTAL----VCAAAAITWCVLGDGPGAACGVVIAVIGPAVEIAL- |
5 | 1vt4I3 | 0.06 | 0.06 | 2.49 | 0.22 | HHpred | | YLDQYFYSHIGHHLKNRMTLFRMVFLDFRFLEQKIR-HDSTAWNAS-GSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLEENL-- |
6 | 4rngA | 0.06 | 0.06 | 2.42 | 0.98 | MUSTER | | DLNNLIGIIAGAITTSALIPQALKIYKT-------SARDVSLAMFIF---MAIGITLWFFYGVLIKEIPVILANLISLILIFLIIFMK |
7 | 4mt1A | 0.17 | 0.14 | 4.50 | 0.73 | CNFpred | | --FANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGK--------------SAVEAALEAARLRFRPIIMTSFAFILGVVPLYIAA |
8 | 1vt4I3 | 0.06 | 0.06 | 2.50 | 0.58 | HHsearch-2 | | YLDQYFYSHIGHHLKNRMTLFRMVFLDFRFLEQKIR-HDSTAWNAS-GSILNTLQQLKFYKPYICDNDPKYERLVNAILDFL-PKIEE |
9 | 2x1gF2 | 0.08 | 0.08 | 3.15 | 0.67 | Neff-PPAS | | LLREFIQHSFKLFESTPEQNFSNISDTMETFFGCLTQIIKKIPQVLEDKTLAYDRLVFYAQRGMTLPESGAIRNSIQFLTHFVMQSRN |
10 | 5lc5b | 0.18 | 0.07 | 2.23 | 0.31 | HHsearch | | ----------------------------------------------------AERVAAFLKNVWAKEPVLVASFAIAGLAVI-LPTL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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