Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | IKKGEMVRVVREKLENSVEAKASDPRFPSYIFETQGEVVDLKGDYAFVKFGKVPTPNIWLRQDQLE |
1 | 6nbqO | 0.68 | 0.67 | 18.98 | 5.74 | SPARKS-K | | IKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKFP-VPTPTVWLRLDQLE |
2 | 6nbqO | 0.68 | 0.67 | 18.98 | 1.67 | FFAS-3D | | IKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKF-PVPTPTVWLRLDQLE |
3 | 6nbqO | 0.68 | 0.67 | 18.98 | 3.04 | HHpred | | IKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKFP-VPTPTVWLRLDQLE |
4 | 6nbqO | 0.68 | 0.67 | 18.98 | 4.51 | MUSTER | | IKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKFP-VPTPTVWLRLDQLE |
5 | 4trtA | 0.15 | 0.14 | 4.62 | 0.73 | CNFpred | | ---VMKANVTKKTLNEGLGLLESNPLLTALKVETSEGGLTLSGIDLSCFVPAEV-ENFVVPAHLFA |
6 | 6nbqO | 0.68 | 0.67 | 18.98 | 3.75 | HHsearch-2 | | IKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKFP-VPTPTVWLRLDQLE |
7 | 6nbqO | 0.68 | 0.67 | 18.98 | 6.06 | Neff-PPAS | | IKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKF-PVPTPTVWLRLDQLE |
8 | 6nbqO | 0.67 | 0.65 | 18.56 | 6.19 | HHsearch | | IKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKFP-VPTPTVWLRLDQL- |
9 | 4ytlA1 | 0.23 | 0.17 | 5.23 | 0.38 | PROSPECTOR2 | | FQPGDRIEVLNGEQRGS-----------------KGIVTRTTKDIATIKLNGFTTP-LEFPISTLR |
10 | 6nbqO | 0.68 | 0.67 | 18.98 | 0.97 | SAM | | IKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKFP-VPTPTVWLRLDQLE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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