Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MPLLTTGKSFIRALEKSGALGVYVPLEGGFEGRYQRRLRANGYTPYNLTARGLGDLSSYLTGIHGVRPPHLGKKNIGQDAAVGPVYFVPPIATYQLETLPPKSKGLVLWIIEGMILSRAEIEYLTYLPQQEPRLKIVVEMGGERYFRWQPLEQ |
1 | 6nbqN | 0.57 | 0.54 | 15.41 | 4.00 | SPARKS-K | | --GLLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDI-------RVYFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLAD |
2 | 6nbqN | 0.57 | 0.53 | 15.23 | 2.92 | FFAS-3D | | ---LLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDIRV-------YFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLAD |
3 | 6nbqN | 0.57 | 0.54 | 15.41 | 7.21 | HHpred | | --GLLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDI-------RVYFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLAD |
4 | 6nbqN | 0.57 | 0.54 | 15.41 | 4.10 | MUSTER | | --GLLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDIR-------VYFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLAD |
5 | 2zc0A | 0.11 | 0.07 | 2.59 | 0.93 | CNFpred | | ------LDLLGRVLIDPGDVVITENPS---YINTLLAFEQLGAKIEGVPVD--------------------------------NDGMRVDLLEEKIKELKAGQKVKLIYTIPTVTMSMERRKALLEIAS-KYDLLIIEDTA------------ |
6 | 6nbqN | 0.57 | 0.54 | 15.41 | 5.86 | HHsearch-2 | | --GLLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDI-------RVYFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLAD |
7 | 6nbqN | 0.57 | 0.53 | 15.23 | 4.64 | Neff-PPAS | | ---LLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDIRV-------YFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLAD |
8 | 6nbqN | 0.57 | 0.54 | 15.41 | 8.74 | HHsearch | | --GLLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDI-------RVYFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLA- |
9 | 6nbqN | 0.56 | 0.53 | 15.24 | 5.44 | SP3 | | --GLLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDIRV-------YFQPPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLAD |
10 | 2cfrA | 0.11 | 0.10 | 3.81 | 0.60 | PROSPECTOR2 | | RCERLRGAALRDVLGRAQGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRQRLPGPPDAPGAVFVLGGEGLRAEGDPSAAPRVRAVLVGYDEHFSFAKLREACAHLR-DPECLLVA-TDRDPWHPLSDLED |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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