Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LPEPLQPLRELAYNLHWSWDHETIALFRRLDRELWESSGHNPVRMLGTIRQERLEEAASDPGFLAHLERVHQRFRHYMQARTWYEACYGVQKSACIAYFSAEFGLTECI |
1 | 4bqeA1 | 0.11 | 0.07 | 2.68 | 1.20 | HHpred | | -----------------PEADDATEIAGNIVYHAKYSPHFSPL------------KFGPEQALYATAESLRDRLQLWNETYVHFNKV----DPKQTYYLSMEYLQGRAL |
2 | 4bqeA1 | 0.11 | 0.07 | 2.68 | 1.64 | HHsearch-2 | | -----------------KISDDATEIAGNIVYHAKYSPHFSPL------------KFGPEQALYATAESLRDRLQLWNETYVHFNKV----DPKQTYYLSMEYLQGRAL |
3 | 4bqeA1 | 0.10 | 0.07 | 2.73 | 2.54 | HHsearch | | ----------KISAKANPEADDATEIAGNIVYHAKYSPHFSPL------------KFGPEQALYATAESLRDRLQLWNETYVHFNKV----DPKQTYYLSMEYLQGRA- |
4 | 1ygpA | 0.12 | 0.10 | 3.56 | 1.04 | HHpred | | -PQEIKSIDTLLSRALWNKFNKAEDFQDRFIDHVETTLARSLY----------------NCDDMVAYEAASMSIRDNLV-IDWNKTQFTTRDPKRVYYLSLEFLMGRAL |
5 | 2aw3A1 | 0.15 | 0.10 | 3.40 | 1.34 | HHsearch-2 | | ----------------SQPIFNDKQFQEALSRQWQRYGLNSAAE------------MTPRQWWLAVSEALAEMLR------AQPF-AKPVANQRHVNYISMEFLIGRLT |
6 | 2aw3A1 | 0.15 | 0.10 | 3.39 | 2.02 | HHsearch | | ----------------SQPIFNDKQFQEALSRQWQRYGLNSAAE------------MTPRQWWLAVSEALAEMLR------AQPF-AKPVANQRHVNYISMEFLIGRL- |
7 | 1ygpA | 0.12 | 0.10 | 3.57 | 1.34 | HHsearch-2 | | LPQEIKSIDTMLSRALWNKFNKAEDFQDRFIDHVETTLARSLY----------------NCDDMVAYEAASMSIRDNLV-IDWNKTQFTTRDPKRVYYLSLEFLMGRAL |
8 | 1ygpA | 0.13 | 0.11 | 3.81 | 2.02 | HHsearch | | LPQEIKSIDTLLSRALWNKFNKAEDFQDRFIDHVETTLARSLY----------------NCDDMVAYEAASMSIRDNLV-IDWNKTQFTTRDPKRVYYLSLEFLMGRA- |
9 | 2aw3A | 0.11 | 0.07 | 2.62 | 1.28 | HHsearch-2 | | -----------------------------------SQPIFNDKQFQEALSR-QWQRYGLEMTPRQWWLAVSEALAEMLRAQPFAKP---VANQRHVNYISMEFLIGRLT |
10 | 2aw3A | 0.12 | 0.07 | 2.61 | 1.92 | HHsearch | | -----------------------------------SQPIFNDKQFQEALSR-QWQRYGAEMTPRQWWLAVSEALAEMLRAQPFAKP---VANQRHVNYISMEFLIGRL- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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