>PF11765 (323 residues) FALEISTNTVDRGTISLNVGDVTVDSGASWSIINNAVSAFVGSLDVQSNAGLYITSTSPL IALQVTLTSLLNTITNDGTIVFDSRDSLTASTYNLVGATFTNTGDMFLAASGIVPSTMSV TAANWDNSGLMVFSQNQRSSGVVNLGAVGGSITNDGQICLENEVYQQTTSINGAGCITAD QDSTIYISNSLLPVANTQNFYLADSQSSIVAQALSTPQTFNVYGFGNGNMVGITLPLTAS VLPPNPAYSYNAATGILTLRNLLVTQNFNIGTGYDPSLFSIVTDSGAGLPSTLLGSVTYS GPVPAQTLPASCQIVCQPIPDTP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FALEISTNTVDRGTISLNVGDVTVDSGASWSIINNAVSAFVGSLDVQSNAGLYITSTSPLIALQVTLTSLLNTITNDGTIVFDSRDSLTASTYNLVGATFTNTGDMFLAASGIVPSTMSVTAANWDNSGLMVFSQNQRSSGVVNLGAVGGSITNDGQICLENEVYQQTTSINGAGCITADQDSTIYISNSLLPVANTQNFYLADSQSSIVAQALSTPQTFNVYGFGNGNMVGITLPLTASVLPPNPAYSYNAATGILTLRNLLVTQNFNIGTGYDPSLFSIVTDSGAGLPSTLLGSVTYSGPVPAQTLPASCQIVCQPIPDTP | |||||||||||||||||||
1 | 5nxkA | 0.12 | 0.10 | 3.51 | 1.13 | SPARKS-K | TTIKLKNNITLNNAITINNGNITIIDGHYINALNS-------------DGGIILNNRGGSAKIDLTIENATLYNTSYGFVNMSSN-----GVDTVTYKDVTAYGGTLVWSKTGAGVKTLNLVGNTTLNSVKSYEVDGQGTEAFSHRTPDGALYVSNAINIANANVVLNNS---------ATDIDMWLLTAVPSTSGISTVTVG-NNASLTMENIGNTEYNIKLDGGRENHFIVN---------ENAAVKMSAKVDNVRIIPIFTRGNIELAKG---SNVHLEVITGSRVAGTVANRIDFNGTATLIKQEG------------- | |||||||||||||
2 | 5nxkA | 0.13 | 0.11 | 3.74 | 1.02 | MUSTER | TTIKLKNNITLNNAITINNGNITIIDGHYINALN-------------SDGGIILNNRGGSAKIDLTIE---ATLYNTGFVNMSS-----NGVDTVTYKDVTAYGGLVWSKTGAGVKTLNLVNTTLNSVKSYEVDGQSCGTEAFSHRTPDGALYVSNAINIANANVVLNNS---------ATDIDMWLLTAVPSTSGISTVTVGNN-ASLTMENIGNTEYNIKLDGGRENHFIVN---------ENAAVKMSAKVDNVRIIPQLTRGNIELAKG---SNVHLEVITGSNFRVAGTVRIDFNGTA-QEG---------------- | |||||||||||||
3 | 5ny0A | 0.13 | 0.10 | 3.52 | 1.99 | CNFpred | ----------------------------TIKLTD--NITLTSAIELTNSRDVTIYGN----GKYINATDG------NGGIFIHNTK-SYTVNLTIEKATLYNQSQGFVHMND--EGTDNITYKNITAYGGTLVWSQTVGTKTLSLEG-TVNFYSVPSYTVGGQTYSTTPAIYVSNEINIADNANIALENS----ATKIDIWMIADTTALTIGN---NATLTMENG-NNSALNIKLDGSNSFTVGGSTVKLSAKVDNVRILPDSNTANVSFAK---GSDVTLHAGTGSNLRM-ISNQIDFNG---------------------- | |||||||||||||
4 | 6n2bA | 0.13 | 0.12 | 4.21 | 1.40 | Neff-PPAS | YKFTVRGGSIYSGERIQTQGEFKAIGVNNLICKGPEVIVNGGGNSIEIKEIMYIQ-----NKLVFNGAPNTNPNTLNANKIYTGL-----GGMELNGYGYYKANEIYSDGEVQVKNYGNFEIGSIGIVKKLTVTDNGRTTDQLEVRNNGRVFIEAGATLVTRAISISGGTIEGPGTRQVNPSFDFDSRMSVTTLPADP----VGATTLGSVYDKSATPWEIVVYGESGINDSELITEVNSGSFPSNVRLYLASKGNITFSNPTSLPLYNPTTGKLVIEGAIITLGSTFNINISGAGIELIYKRAGSTIESSITSTLNYIPPP- | |||||||||||||
5 | 5ny0A | 0.13 | 0.11 | 3.95 | 1.04 | PROSPECTOR2 | EDIKLTDNITLTSAIELTNVSRDVDGNGGIFIHNTKSYTVNATLYNQSQYGFVHMNDEGTDNITYKTHVGTKTLSLEGTVNFYSVPSYTVGGQTYSTDAFKIGDTTPAIYVSADNANIALENSA-TKIDIWMIADIGIHPHTTAL-----TIGNNATLTMNNSALNIKLDGDTSNSFTVGEGSTVKLSA---------------KVDNVRILPYEDSNTANVS-FAKGSDVTLHA---------GTGSNLRMGASISNQIDFNGKATFIKDSEFDYYWNDQQKTGSTGVNPGSNVLFQAGPGASNVNT--------------Y | |||||||||||||
6 | 5ny0A | 0.12 | 0.11 | 3.71 | 1.07 | SPARKS-K | HTIKLTDNITLTSAIELTNVDVTIYGGKYINATD-------------GNGGIFIHNTKS-YTVNLTIEKATLYNQSYGFVHMNDE-----GTDNITYKNITAYGGTLVWSQTHVGTKTLSLEGTVNFYSVPAIYVSNADNANIALENSATKI----DIWMIAD----IGIHPHTTALTIGNNATLTMENGNNSADTSNSFTVGEG-STVKLSAK--VDNVRILPYEDSNTANVSFA-------KGSDVTLHAGTGSNLRMGASISNQIDFNG-------KATFIKDSEFDYYWNDQQKTGSTGVANFNPGSNVLFQAGPGASN | |||||||||||||
7 | 2odlA | 0.15 | 0.12 | 4.19 | 1.93 | CNFpred | ----AVFNRVTSNQISQLKGILDSN--GQVFLINPNGITIGKDAIINT-NGFTASTLDI-RNFTFEQTKALAEIVNHGLITVGK-----DGSVNLIGGKVKNEGVISVN-----GGSISLLA-----GQKITISDIINPTITYSIAAPENEAVNLGDIFAKGGNINVRATIRNQGKLSADSSGNIVLSAKEGEAEIGGVISAQNKGGKLMITGDKV-AVIDLSGKE-GGETYLGGDERGEGIQLAKKTSLEK-GSTINVSGKEKGGRAIVWGDIALIDGNINAQGSGDIA-KTGGFVETSG---------------------- | |||||||||||||
8 | 4wa0A | 0.09 | 0.08 | 3.21 | 1.31 | Neff-PPAS | -PSSPLDYAIFSKGALNTNKNLTVENG---SVYSGGDLTIDGGAVFNIDNLISKGEV---INQDSDSRCRDNNIVVRNIIYVEKSLKANRIS----PRSTNIDAKTIYVGQEQLYGAGSYKFVQLFSDSNVKLAGPGVNESTLASIRGTLEVIDGATVTLKSAVYCNSLVVRNGSRLILENGAKLYLATTSGLLTTPLPADSVGSNQLGSTADTSQTPPQIVIYGESYINDNEARIEISARLGSPIVD---FSTLQLHLISRGNITFVGGGLTINGSIISLGSTFNINATGNPYAGLTLKYQ-PSPPIQQDIESNTGIQPSQ- | |||||||||||||
9 | 4wa0A | 0.17 | 0.15 | 5.01 | 1.02 | PROSPECTOR2 | TS--VPSSAIFSKGALNTNKNLTVENGSVYSTIDGGAVFNIDNLIS-KGEVINQDSDSRCRDNNIVVISPRSTNIDAKTIYVGQEQLYGAGSYKFV--QLFSDSNVKLAGPG---------VNEVSTLASIRGTLEVIDGATVTLKSNSAVVRNGSRLILENGAKLYLATTPDASTIIQNNGGTISYSSSFSYPSPPAEISVGSNQLGSTADTSQTPPQIVIYG---ESYINISARLGSPIVDFSTLQLHLISRGNITFVGGGLTINGSIISLGSTFNINATGNPYAGL------TLKYQ---PSPPIQQDIESNTGIQPS-Q | |||||||||||||
10 | 6beaA | 0.11 | 0.11 | 3.91 | 1.01 | SPARKS-K | DPVTLNTDVVINGDNKI--TAVTIEGGHDITATSTVNVKVSGNVVINTDSTITAQGEGTYVRTAMVIDSTGDVVVNGGNFVAKNEKGSTGNNLTLNGTTINAQGSTAIFAQKGNTDNITLADSNIINGGIETIVTAGNKTGIHTVNAANNKQTIYASASAQGGSATQNLNLSVADS-TIYSDVLALSESEN-SASTTTNVNMNVARSYWETFNSGDKAGSDLDINSDSSVWKGKVSGAGDASQNGSVWNVTGSSTVDALAVKDSTVNITLIVDASSENLRVYSAGSLDLINEQTAFISTGKDSTLKATGTTEGGLYQYDLTQG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |