Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | PGIDMLGVPFGWQRGEGDWTGVSAAVARGEAVEVIQDAGSTLWQDHLPQGHPFQFLATDVAKARIWISPTQRRFSSASDFPKIQWHP |
1 | 3eeqA3 | 0.15 | 0.13 | 4.24 | 1.13 | SPARKS-K | | LSIERIANILIAKIINPNIVKINAALLRDESICIDGI----------DVNVNFPENIKVCS---YIISL--RGDKEYKDKIVVWLKP |
2 | 3eeqA3 | 0.14 | 0.11 | 3.92 | 1.07 | MUSTER | | LSIERIANILIAKIINPEIVKINAALLRDESICID-----------IDVNVNFPENIKVCS---YIISLR--GDKEYKDKIVVWLKP |
3 | 3eeqA | 0.14 | 0.11 | 3.93 | 1.74 | HHsearch-2 | | LSIERIANILIAKIINPNIVKINAALLRDESICIDGI-D---VNVNFP---------ENIKVCSYIISLRGDK--EYKDKIVVWLKP |
4 | 3eeqA | 0.13 | 0.10 | 3.61 | 2.58 | HHsearch | | LSIERIANILIAKIINPNIVKINAALLRDESICIDGI-D---VNVNFP---------ENIKVCSYIISLRGDK--EYKDKIVVWLK- |
5 | 3eeqA | 0.14 | 0.11 | 3.93 | 2.00 | SP3 | | LSIERIANILIAKIINENIVKINAALLRDESICIDGI--------DVNVNFPE-----NIKVCSYIISLR--GDKEYKDKIVVWLKP |
6 | 3eeqA | 0.15 | 0.13 | 4.24 | 1.06 | SPARKS-K | | LSIERIANILIAKIINPNIVKINAALLRDESICIDGI----------DVNVNFPENIKVCS---YIISL--RGDKEYKDKIVVWLKP |
7 | 3eeqA3 | 0.13 | 0.10 | 3.61 | 1.21 | HHsearch | | LSIERIANILIAKIINPNIVKINAALLRDESICIDGI-DVN---VNFP---------ENIKVCSYIISLRGD--KEYKDKIVVWLK- |
8 | 6emsA1 | 0.08 | 0.07 | 2.72 | 0.71 | SPARKS-K | | KGISSIGTLSKFRKSKNKLQDIAIEIVHGKGAVFRVPEKTAVAWDLNGNRVDGSYYAREKFEPVLTPEELREKLP------------ |
9 | 3eeqA3 | 0.14 | 0.11 | 3.92 | 0.41 | FFAS-3D | | LSIERIANILIAKINPENIVKINAALLRDESICID-------------GIDVNVNFPENIKVCSYIIS---LRGDKEYKDKIVVWKP |
10 | 3eeqA | 0.12 | 0.10 | 3.62 | 0.97 | HHpred | | LSIERIANILIAKIINPNIVKINAALLRDESICIDGI-D---V-------NVNFP--ENIKVCSYIISLRGDKE--YKDKIVVWLKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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