Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | VNHPAHYTSGGIECIDAMQAAFGAEVVKDFCLCNAFKYLWRHRSKNGVEDLKKCRWYLN |
1 | 2hyzA1 | 0.12 | 0.12 | 4.20 | 1.14 | SPARKS-K | | LGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEIEYYQKALELDP |
2 | 5nnpA7 | 0.16 | 0.14 | 4.51 | 1.13 | MUSTER | | -----YYMSRDLRALEYVEKAIPKNVDFHMTKARIFKHQGDLAK---AETMDYARSL-K |
3 | 5m72A2 | 0.09 | 0.08 | 3.25 | 1.44 | SP3 | | FEKYCEYRLNRINALKTIESANQQTDKLKELYGQVLYRLERYDE--CLAVYRDLVRNSQ |
4 | 2c0mC2 | 0.08 | 0.08 | 3.29 | 1.10 | SPARKS-K | | LGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQEEAVAAYRRALELQP |
5 | 3uq3A1 | 0.11 | 0.10 | 3.64 | 0.43 | FFAS-3D | | ----KFYKARQFEAIEHYNKAWELHKDITYLNNRAAAEYEKGEYETAISTLNDAVEQ-- |
6 | 6ez3A | 0.18 | 0.15 | 4.95 | 0.22 | HHpred | | ----------YIDIYKTIVDQFTDSNFKNSCLKMSLQALQSKGKNETDETLEYAAQYVL |
7 | 1ng6A2 | 0.08 | 0.07 | 2.73 | 1.08 | MUSTER | | ---PEQLSEEELRVNETIAEVASSKADMGKVMGAIMPKV---GKADGSLINKLVSSQLS |
8 | 1gxbA | 0.17 | 0.14 | 4.47 | 0.55 | CNFpred | | -----------EDSAIKIVRAFLDEHVAEFIKINTAVALFALDRVDFREGYEYADHLIE |
9 | 1vt4I3 | 0.11 | 0.10 | 3.66 | 0.44 | HHsearch-2 | | LIPPYLDQYHHLKNIEHPERM-----TLFRMVFLDFRFLEQKIRHDILNTLQQLKFYKP |
10 | 2hyzA1 | 0.18 | 0.17 | 5.53 | 0.91 | Neff-PPAS | | ---NAYYKQGDDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDAIEYYQKALELDP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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