>PF11702 (485 residues) DLPELSASVESAASDQAERIEHHIKRPRADYRPAVVREDSLVNLSRGKEKHITSLGLERM VLNIKEKKNLEPLPAPMTTVSPPVVDITPRPSTPTPTPPSVSTTKPTPSFSAFEDQQMHQ STESCSTTAPEGNDSDAAQTAASDTSVSSSGILPSRPGLVKSPSIVRGFSPAMVSSSYRS QPRLAVEPGPAHSPARLRPSPLKKKGGMFTLGGSSGDDDESSFEDRMAIQGRHRSSLSDE LKPNTSNPSPNKKVASFRDDVGIIKDDRDNDEDAIETEDEVSESAIDDDEDSDWEDSVTE SGRSSVEENAMFQRVDSRPNLVSRRSMLTMMMHQPARMQGNNSRSTPALQRSRLTSPNGP AVAASPPDHDEDNLTMRGPDVPRSKPIIVRAPPQSVAHSPRTTRRNMLATELTESLRRHL LWERQQKSATANAFLKRRHTAHDMANLKEYPNPSGQSGSSATDAKNSSFTNYTDFGPWEY HVKGW |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | DLPELSASVESAASDQAERIEHHIKRPRADYRPAVVREDSLVNLSRGKEKHITSLGLERMVLNIKEKKNLEPLPAPMTTVSPPVVDITPRPSTPTPTPPSVSTTKPTPSFSAFEDQQMHQSTESCSTTAPEGNDSDAAQTAASDTSVSSSGILPSRPGLVKSPSIVRGFSPAMVSSSYRSQPRLAVEPGPAHSPARLRPSPLKKKGGMFTLGGSSGDDDESSFEDRMAIQGRHRSSLSDELKPNTSNPSPNKKVASFRDDVGIIKDDRDNDEDAIETEDEVSESAIDDDEDSDWEDSVTESGRSSVEENAMFQRVDSRPNLVSRRSMLTMMMHQPARMQGNNSRSTPALQRSRLTSPNGPAVAASPPDHDEDNLTMRGPDVPRSKPIIVRAPPQSVAHSPRTTRRNMLATELTESLRRHLLWERQQKSATANAFLKRRHTAHDMANLKEYPNPSGQSGSSATDAKNSSFTNYTDFGPWEYHVKGW | |||||||||||||||||||
1 | 5jcss | 0.11 | 0.11 | 3.79 | 1.65 | SPARKS-K | MRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKYMNTKFISLNKGAHTRVVSVRDLIKLILFKNNGINKPDQLIQSAGAIGEFKASLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLSVCIQMTEPVAKMLAKKLTVIGYKPKTVAVPIQENATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFN-FVEGSLVKTIRAGEWLDEVTEPDSRSISEKGDAEPIKAHPDFCMNP--------ATDVGKRDLPRSRFTEIYVHSPERDITDLLSDEWVGNDIAELYLEAKKLSDNNTIVDGSNQKPHFSIR-------------TLTRTLLYVTDIIHSLYDGFCMSFLTLLDQVIEKFTLGRLKNVKSIMSYIITPF----VEKNMMNLVRATS | |||||||||||||
2 | 1zvoC | 0.09 | 0.08 | 2.95 | 1.33 | MUSTER | QESG-PGLVKIVSGGPIRRTGYYPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLN--RSMSARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLITGYHPTSVTYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQQHTASKSKKEIFRWPESPKAQASSVPTAQPQA----EGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTL---PRSLWNAGTS-NHPSLPPQRLMALREPAAQAPVKLSNLLASSDPPEAASWLLCEVSGFSPPNILLM----------------------W------------LEDQRE------VNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQP-AT | |||||||||||||
3 | 2cseB | 0.10 | 0.10 | 3.58 | 2.89 | Neff-PPAS | KYSDLLTYVDCYVGVSARQALNNFQKQVPVITPTRQTMYVDSIQAALKALEKWEIDLRVAQTLLPTNVPIGEVSCPMQSVVKLLDDQLPDDSLIRRYPKEAAVAVSEGTVMNEAVNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEPEIIASLVPVPAPVFAIPPKPADYNVRTKIDEATWLRMIPKTMGTLFQIQVTDNTGTNWHFNLRGG----TRVVNLDQIAPMRFVLDLGGKSYKETSWDPNGKKVGFIVFQSKIPFELWTAASQIGQATVVNYVQLYAEDSSFTAQSIIATTSLAYNYEP--EQLNKTDPEMNYYLLATFIDSAAITPTNMTQPDVWDALLTMSPLSAGEVTVKGAVVSEVVPAELIGSYTPESLNASLPNDAARCMID--------RASKIAEAIKIDDDAGPDEYSPNSVPIQGQLA----ISQLETGYGVRIFNPKGILSKIASRAMQAFIGDPSTIITQAA | |||||||||||||
4 | 2nbiA | 0.10 | 0.09 | 3.38 | 1.91 | PROSPECTOR2 | QPSDLNPSLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATEC-------RPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSS---RPLDCTDPAVNRPDCDVLPTPQNINCPACCAFE----CRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPVGRPDCNVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGP----------------------QPSSQPSECADVLELTDPSVNRPDCDKLSTAIDFTCPTCCPTQCRPDNPMFSPSPDGLPSPTE | |||||||||||||
5 | 4btgA | 0.11 | 0.11 | 3.98 | 1.64 | SPARKS-K | IWRKLTAYI-TGSSNRAIKADAVGKVPPTAILEQLRTLAPSEHLSPLGGRTATYPNFYALVDCVRARRMLTALSSVDSKMLQATFKAKGALAPANAATTAFERSRGNFDANPSTPKELDPSARLRNTNGIDQLQRGRAEVIFSDEELSSTIIPWFPFKLRPINETTIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANNSN-----QRFLDVEPGISDRMSATLAPIGNTFAAVYEAVSQRGTVNSNGAEMMVAIAALRTGIVDESLAVAHNPEVVVSEHQGVAAEQWN--VRTELRIP-----VGYNIEGGSIRTPEP-LEAIAYNKPIQPSEVLQAKVLDLANHTTSIHIWPWHEASTEFAYEDAYSVTIRNKRYTAEVKEQRRERVRILKPTVAIIQMWYSWFVEDDRTLAAARRTSRDDAEKLAIDGRRMQNAVTLLRKIEMTTGIGRGLIDDSSDLHWAGLAVLQMMGLLSRSE | |||||||||||||
6 | 5mqfT | 0.10 | 0.08 | 2.79 | 0.77 | FFAS-3D | ------------------------KNSLAYQRMSW---EALKKSINGLINKVNISNISIIIQELLQGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEGRFCMLKKEYMESFEG----IFKEQYDTIHRLETNKLRVLECIKEETTTSSSRIFVKIFFQE--LCEYMGLPKLNARLKDETLQPFFEGL--LPRD------------------------------NPRNTRFNFFTSGLTDELREHL----------------------------------------------------------------- | |||||||||||||
7 | 1vw4T | 0.17 | 0.04 | 1.15 | 0.37 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDHPLWQF--FS-NKKFIRSADPSHIRPWSIPLREQNVLARENHLLKNIVGFSELSNTTMWIRHVLNERELAYSASRFQESERKKFLDTL-ANDYFDDEVASM------------- | |||||||||||||
8 | 2nbiA1 | 0.16 | 0.12 | 4.00 | 1.30 | MUSTER | DLNPSSQPSECADVLEECPIDECFLPYSDASRPP-----SCLSFGRPDCDVLPT----------PQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDTAVGRPDCDVLPFPNNLGCPACCPSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQ-VIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACC-------AFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDNVLPFPNNIGCPSCCPFEC-SPDNPMFTPSPDGSPPSPTMLPSPSPSAVTVPLTPAPSSAPTR--------------------------------------------------------------------------------------- | |||||||||||||
9 | 3tlmA | 0.08 | 0.02 | 0.80 | 0.37 | CNFpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YTGREFDDLPLAEQREACR---------ACCFARVEPT----HKSKIVEYLQSFDEITAMT-VNDAPALKKAE----IGIAMGSGTAVAKTA-------------EMVLAD-----DNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFL------------------------------------------------- | |||||||||||||
10 | 6nyfA1 | 0.14 | 0.07 | 2.26 | 0.47 | HHsearch-2 | ---------------------------------------------------------------------LLGWG--LK----QAEEAN---KTPD-KPDKVW------------RIQAG----KGFNE-FPNKEYDLKSLLSSKIDGGW--D----WGNAATHYWIKGGQWNKLEVDMKDATKLSGLRNFTGGDL---DVN--MQKATLRLGQFNGN-SFTSYKDSADRTTRV--D-------------FNAKNILIDNFLE-INNRVG--SGAGR-KASSTVLTLQAS----------EGITSSKNAESLYDG--ATLNLASN----SVKL-NGNRLQYVGAYLAPSYSTI-----NT---SKVTGE-----VNFNHLDHNAAQAG-------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |