Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MKIEKTLNVPSPVFFDKIIDSVIFDIRKATGKTVSRKQLAGYEYVKEFSASSRAKIKIEEVIENQVYQFRTETTKNEFVVRYELETINEKQTKVIYTETMKSFGILQQMNDMLLGTILG |
1 | 3ijtB | 0.11 | 0.11 | 3.93 | 1.75 | SPARKS-K | | FSFELAVNTKKEDAWTYYSQ--VNQWFVWEGDSLEGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPDGTISLRHSVSLTDSADVPESVGKLKQILET |
2 | 3ijtB | 0.14 | 0.13 | 4.60 | 1.72 | FFAS-3D | | MKFELAVNTKKEDAWTYYSQ--VNQWFVWEGDSLEGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPDGTISLRHSVSLTIFADVPESVGKLKQIL-- |
3 | 3ijtB | 0.09 | 0.09 | 3.47 | 0.88 | HHpred | | FSFELAVNTKKEDAWTYYSQVNQWWEGDLEQISL-EGEFTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPDGTISLRHSVSLTDSTEEALAFLKQIFAD-- |
4 | 3ijtB | 0.10 | 0.10 | 3.71 | 1.66 | MUSTER | | FSFELAVNTKKEDAWTYYSQ--VNQWFVWEGDSLEGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPDGTISLRHSVSLTDSTEEALAFLKQIFADVP |
5 | 2nn5A | 0.06 | 0.06 | 2.52 | 1.63 | CNFpred | | FGTERAISASPQTIWRYLTET--DKLKQWFPELEIGELGVNGFWRFILP-DFEETMPFTDYAEEKYLGVTWD----TGIIYFDLKEQAPHQTLLVFSESLPE-KDIAGWSIVLNRLKQV |
6 | 3ijtB | 0.09 | 0.09 | 3.49 | 0.82 | HHsearch-2 | | FSFELAVNTKKEDAWTYYSQVNQWWEGDLEQISL-EGEFTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPDGTISLRHSVSLTDSTEEALAFLKQIFADVP |
7 | 3ijtB | 0.11 | 0.11 | 3.93 | 1.83 | Neff-PPAS | | FSFELAVNTKKEDAWTYYSQ--VNQWFVWEGDSLEGEFTTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPDGTISLRHSVSLTDSDTTEEALAFLKQIFAD |
8 | 3ijtB | 0.09 | 0.09 | 3.48 | 1.19 | HHsearch | | FSFELAVNTKKEDAWTYYSQVNQWWEGDLEQISL-EGEFTGQKGKMKMEDMPELAFTLVEVRENQCFSDLTATPFGNVLFEHEILENPDGTISLRHSVSLTDSTEEALAFLKQIFADV- |
9 | 2pcsA | 0.15 | 0.15 | 5.07 | 0.93 | PROSPECTOR2 | | LNGNIELKGTVEEVWSKLMD--PSILSKCIMGCKSLELIGEDKYKADLQIGIDAIIEVTDIKPPYHYKLLVNGEGGNAEGVIDLTPINDECTQLTYTYSAEVGGKVAAIGQRMLGGVAH |
10 | 2pcsA | 0.16 | 0.15 | 5.02 | 0.72 | SAM | | -NGSIELKGTVEEVWSKLMDPSI---LSKCIMGCKSLELIEDKYKADLQGKYDAIIEVTDIKPPYHYKLLVNGEFVNAEGVIDLTPINDECTQLTYTYSAEVGGKVAAIGQRMLG---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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