Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LGLLVIHELIHGLFFKLYQPEKKVEFGFKNGMAYATSSDSYYPRNQYIWIAAAPFVLITLLLLALFIAEALSKVLFVMLASIHAAGCVGDFYYLYLLSKQPKD |
1 | 6a2jA3 | 0.19 | 0.16 | 5.00 | 1.03 | SPARKS-K | | IVVLLLFVWIIVAAVHAITSYKD--------------------QKQIFWGWISCLIFITLQALSGIMIVYSELAGFALAHSFFIACLFGVLCYFLLLIARFRY |
2 | 6a2jA3 | 0.13 | 0.12 | 4.07 | 1.05 | MUSTER | | QIGKKMQFHMIGILIYSYI--------WIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRY |
3 | 3b4rA1 | 0.19 | 0.16 | 5.03 | 1.18 | HHsearch-2 | | FVSVVLHELGHSYVAKKYGVKI-EKILLIGG--VAMMDKI-PKEGELRIGIAGPLVSFIIGIVLL-IVSQFNYPLLYTLSLLNLMLGGFNL------------ |
4 | 3b4rA | 0.18 | 0.17 | 5.68 | 1.03 | SPARKS-K | | FVSVVLHELGHSYVAKKYGVKEKILLLPIGGV----AMMDKIPKEGELRIGIAGPLVSFIIGIVLLIVNINGYPLLYTLSLLNLMLGGFDGGRILRAILSKKY |
5 | 3b4rA | 0.17 | 0.16 | 5.13 | 0.76 | FFAS-3D | | FVSVVLHELGHSYVAKKYGVKIEKILLLPIG--GVAMMDKIPKEGELRIGIAGPLVSFIIGIVLLIVSQINGYPLLYTLSLLNLMLGGFDGGRILRAI----- |
6 | 3b4rA | 0.16 | 0.14 | 4.54 | 0.43 | HHpred | | FVSVVLHELGHSYVAKKYGVK-IEKILLLPIGGVAMMDKI-PKEGELRIGIAGPLVSFIIGIVLLIVSQFFNGPLLYTLSLLNLMLGGFNLI----------- |
7 | 5ezmA3 | 0.15 | 0.13 | 4.26 | 0.98 | MUSTER | | LIGMAIVAACGLLASPVVATLNA-------------IPNSFY-RAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPAS- |
8 | 5xtcr | 0.13 | 0.13 | 4.37 | 0.87 | CNFpred | | VLAAVLLKLGGYGMMRLTLI-PFLVLSLWGMIMTSSICL---QTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLANSNYERTHS |
9 | 3b4rA | 0.18 | 0.17 | 5.68 | 1.18 | HHsearch-2 | | FVSVVLHELGHSYVAKKYGVKEKILLLPIGGV--AMMDKI-PKEGELRIGIAGPLVSFIIGIVLL-IVSQFGYPLLYTLSLLNLMLGGFDGGRILRAILSGYL |
10 | 6a2jA3 | 0.13 | 0.13 | 4.41 | 0.99 | Neff-PPAS | | QIGKKMQFHMIGILIYSYIVVLLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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