Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MRRIDVIAIGIGVFAAGGVIYLFFQAVGFDGVSAGIWSQALLVAGLVGWTLTYLFRVMGKNMTYNQQVKDYEDAVLQKRLEQMTPEELEKLQQEIE |
1 | 3zh9B3 | 0.08 | 0.07 | 2.91 | 0.74 | SPARKS-K | | SLEQNIFELINKIVTESLQIFYDLLKQNEE-----PIKIMALISNQFRLILQTKYFAEQGYG-QKQIASNLRVKLAMDQARLFSEEELRLIIEQLA |
2 | 4hkrA | 0.10 | 0.08 | 3.10 | 0.78 | FFAS-3D | | -----STLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPVMIIFMAFAIH---------FYRSLVSHKYEVTVSGIRELEMLKEQMEQDHLE |
3 | 5mlzA2 | 0.11 | 0.10 | 3.73 | 0.29 | HHpred | | ---VKFSIVGLSGILVNEGFLWLFVNLGIPKEIAVIPAVELSILNNFFWNDIWTFKDIRRG-SIFSRLLKFHIAIVYW-ILLIHY-LIANLVGI-- |
4 | 3b5xA3 | 0.12 | 0.09 | 3.33 | 0.74 | MUSTER | | -----------LVLIVVAPVVAFAISF----VSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVYG--GQEVERKRFDKVSNSMRQQTMKLVSAQ-- |
5 | 4u8yA | 0.12 | 0.11 | 4.03 | 0.64 | CNFpred | | --FRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDNAIVVVENVER----VMAEEGLPPKEATRKSMGQIQGALVGIAMVLSA |
6 | 2yqjA | 0.11 | 0.04 | 1.50 | 0.35 | HHsearch-2 | | ------------------------------------------------------------VKSQQQIIDSFKQAQLFQYYDSLTIDQQQEFIDQLS |
7 | 5cwqA2 | 0.04 | 0.04 | 2.11 | 0.64 | Neff-PPAS | | REQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH- |
8 | 2xrhA | 0.14 | 0.09 | 3.20 | 0.61 | HHsearch | | --------------AIDPFTMDLAKMGVVAPQDI----------------VDYTLKKRMEKMPE-DKRKAFHKQLATKNTDKMTVADFEARQKAV- |
9 | 4yxxA2 | 0.16 | 0.14 | 4.50 | 0.66 | SP3 | | -----------TVEEAVKRALKLKTKLGVSLEQALKILEVAAELGTTVEEAVKRALKLKTKVSLEQALKILEVAAKLG----TTVEEAVKRALKLK |
10 | 5cwpA1 | 0.08 | 0.08 | 3.25 | 0.51 | PROSPECTOR2 | | MSSEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVLKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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