Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | PALFREAVAAMNAVTVRPEIELGPIRPPQRLAPYSYALGAEIKHPELDVIPERSEGDAFGRLIMLYDPDGSDAWDGTIRLVAYVQADLDSSEAVDPLLPEVAWSWLVDALTARTDQVRALGGTVTATTSVRYGDISGPPRAHQLELRASWTATTPDLGAHVQAFCDVLEHAAGLPPAGVT |
1 | 2iqiF | 0.14 | 0.11 | 3.63 | 0.67 | SPARKS-K | | --------ATIYAPTV-------RVTPNPAWPQVSWQLLVAPSAARIIDSPR-----------INVRPTPGEL-----QVYHGAGWA--------QPATDMLEDSVVRAFEDSGK-IAAVARYKLAIDVRRFESDYAGQSLPAATIELNAKSSSTDTAAVAAAFEQALTQVTTELVGWTL |
2 | 6o7yA | 0.17 | 0.12 | 4.02 | 0.48 | FFAS-3D | | -EEFWSTIN--------------SLPKLHQLGNGSTFIFAR-----NNVDASYEAFPNGTRVLV----------------------DLYKASVAEKGMDFVLSSVLGEGLTYDVFNGKKVCDVVRLSSRPN----QESPELVRLEV---WLSDQLYAKDVIPYIRKGLNE-AGLSFTDF- |
3 | 3hlzB | 0.14 | 0.09 | 3.21 | 0.43 | HHpred | | ----------------------------KFISPGAW-FS-NYPSDW------NEFEDGEGS-FLFYNPD---VWTGNFRISAFKGN------------ASYGKDAIRQELKENDASLVK-IGTWDCAYSKEFQEEGTYTGTGNIAFECSFTVPKGG---SAKEAEEVIATLEAR------ |
4 | 3qp6A | 0.14 | 0.13 | 4.34 | 0.57 | MUSTER | | QWTLLEWIHMAGHIETEGELKLDNI---LSQAPSDRIILVLGRLNNQNQIQRMEKVLNVS-----YPSDWLNQYENFAQHDPIMRIHLGQGPERFSRAKGSEEKRFIAEASSNGMGS----GITFSAASDRNNVG------SILSIGGKEPGRNAALVAMLNCLTPHLHQAA-LPPASPS |
5 | 3jrwA | 0.16 | 0.13 | 4.24 | 0.81 | CNFpred | | AEDFPILFRQVQSEIPGSPIFLMKLAQ-----ARHLEVQILADQ--------GNAVSLFGRDCSIQRR--------HQKIVEEAPATIAP-----LAIFEFMEQCAIRLAKTV----YVSAGTVEYLYSQ--------GSFHFLELNPRLQHPCTEMIADVNLPAAQLQIAMGVPLHRLK |
6 | 1zyrM2 | 0.19 | 0.10 | 3.22 | 0.32 | HHsearch-2 | | -------------------------------------------------------ARSTGPYSLIQQPLGGKAQFGGQRF---------GEMEVWALEAYGAAHTLQEMLTLKSDDIE---GRN-----AAYEAIIKGEDVPEP-----SVP---------ESFRVLVKELQALDVQTLD |
7 | 1yobA | 0.12 | 0.11 | 3.76 | 0.66 | Neff-PPAS | | --KTRKVAKSIKKFDDETMSDALNVNSAEDFAQYQFLILGTPTLGEGELPGLSSDAENESWEEFLPKIEGLDFSGKTVALFGLGDQVGYPENYL------DALGELYSFFKDRGAKIVGSWS----TDGYEFESSEAVVDGKFVGLALDLDNQSGKTDERVAAWLAQIAPEFGLSL---- |
8 | 3hlzB | 0.15 | 0.11 | 3.56 | 0.75 | HHsearch | | ------------------------GQGKKFISPGAW-FS-NYPSDWN------EFEDGEGS-FLFYNPD---VWTGNFRISAFKGN------------ASYGKDAIRQELKENDASLVK-IGTWDCAYSKEFQEEGTITGTGNIAFECSFTVPKGG---SAKEAEEVIATLEAEKPAEL- |
9 | 4opeA1 | 0.13 | 0.10 | 3.48 | 0.68 | SP3 | | LAQFWRNLREGRDC-------VEEVPE-DRWD----------HGRFYDPDPAAPGKAYAKWGGWLSDVASFDPFFRSQV----------EAEHIDPIFLQTVWHLLEDATSRAALSKVRT--GVFVGLYGHYQLYGVEEALRG---------TGAATSSSYASVANRVSYFFDFDGPSIA |
10 | 5t3eA2 | 0.14 | 0.12 | 4.19 | 0.64 | PROSPECTOR2 | | SFTFQDYMHIYDDMKRGTEYKLPDFPPAPSLLL--------------AKDPAEIGTPNFQSLTTIITHDEVEQIVGDFTSLILLDMDMDQKQPFFTKVEQTQGVEFIRDYTRYHQMRPKAVMPIVFTSM-----LAGAGVYLDNELLVSWNFDAEVMESMFTQFVELLDQLVDINPLRIS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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