Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | TMVKGDLMALGYGNGESVTYIAKAKRLMVEKGYSYYKNPRLARVPVYVLEELFGYD |
1 | 4ww0A3 | 0.15 | 0.12 | 4.23 | 1.01 | SPARKS-K | | DVDLEFVARAGLTGADLENLLNEAALLAARKGKE--------EITMEEIEEALDRI |
2 | 4hh7A2 | 0.10 | 0.09 | 3.34 | 1.05 | SP3 | | LITAKEASQLGKNDEYFAHIYKRFPHRLEGIDHIYTGKTLF--LTKESLEVFKK-- |
3 | 5ubvA2 | 0.12 | 0.11 | 3.75 | 0.97 | SPARKS-K | | DVNIAAIAARGLSGAELENIVNQAAVHASKEKAKA--------VMQAHFEWAKDKV |
4 | 4b4tL3 | 0.06 | 0.05 | 2.32 | 0.51 | FFAS-3D | | EFDFEAAVKMGFNGADIRNCATEAGFFAIRDDRDHINPDDL----MKAVRKVA--- |
5 | 5cvrA2 | 0.21 | 0.20 | 6.23 | 0.29 | HHpred | | TMTRGDIGNLGLTVETISRLLGR----FQKTEMLTVKGKYITINDHDALAELAGSA |
6 | 3ez2B2 | 0.25 | 0.23 | 7.20 | 0.97 | MUSTER | | VYAKAALAKLLLT----RANVDYAVSEMEEKGYVFDKRPAMSIQNIIDIYEHRGVP |
7 | 1o87A | 0.11 | 0.11 | 3.86 | 0.52 | CNFpred | | --IRRALMDADVNLEVARDFVERVREEALGKQVLESPAEVILATVYEALKEALGGE |
8 | 1o57A1 | 0.09 | 0.07 | 2.75 | 0.31 | HHsearch-2 | | LIPLTFFSEYESAKSSISEDLTIIKQTFEQQGITLLTVPGVKYIPK---------- |
9 | 4ww0A3 | 0.15 | 0.12 | 4.23 | 0.80 | Neff-PPAS | | DVDLEFVARAGLTGADLENLLNEAALLAARKGKEE--------ITMEEIEEALDRI |
10 | 1o57A1 | 0.09 | 0.07 | 2.75 | 0.53 | HHsearch | | LIPLTFFSEYESAKSSISEDLTIIKQTFEQQGITLLTVPGAGVKPK---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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